RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SIM2Q14190 667 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIP11Q15643 1979 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TPD52L1Q16890 204 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CCDC142Q17RM4 750 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 DPCR1Q3MIW9 517 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 BBS9Q3SYG4 887 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CBWD6Q4V339 395 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ARHGAP29Q52LW3 1261 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM61Q5EBN2 209 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CBWD3Q5JTY5 395 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 PRSS36Q5K4E3 855 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CBWD5Q5RIA9 395 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 GPR158Q5T848 1215 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 VSTM1Q6UX27 236 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 UNC5AQ6ZN44 842 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 UBE2R2Q712K3 238 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 UNC93AQ86WB7 457 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CREBRFQ8IUR6 639 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 SCN4BQ8IWT1 228 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 NPAS3Q8IXF0 933 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 UBALD2Q8IYN6 164 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 B3GALNT2Q8NCR0 500 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ACRBPQ8NEB7 543 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 VPS37AQ8NEZ2 397 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 RSAD2Q8WXG1 361 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 EDAQ92838 391 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 SEMA4DQ92854 862 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 NXPE3Q969Y0 559 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 SKA1Q96BD8 255 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TCEAL4Q96EI5 215 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 MCRS1Q96EZ8 462 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 PCED1BQ96HM7 432 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 GCNAQ96QF7 691 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 LPIN3Q9BQK8 851 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 BHLHE41Q9C0J9 482 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 SDCBP2Q9H190 292 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 DPEP3Q9H4B8 488 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 CYP3A43Q9HB55 503 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 APOBEC3GQ9HC16 384 aaKnown RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ARHGEF4Q9NR80 690 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 GDE1Q9NZC3 331 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 TCF20Q9UGU0 1960 aaKnown RBP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 NME7Q9Y5B8 376 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 NUMBLQ9Y6R0 609 aa6.12□□□□□ -1.43
HMGB1P42-201ENST00000532126 ATP8B3O60423 1300 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 A0A1W2PQU0 124 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM86C2PA6NEL3 165 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC38A8A6NNN8 435 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 LRRN2O75325 713 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MOSPD3O75425 235 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 RNASEH2AO75792 299 aaKnown RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CSH1P0DML2 217 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CSH2P0DML3 217 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 GJA1P17302 382 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CEBPBP17676 345 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CD58P19256 250 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ANXA13P27216 316 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 GABRR2P28476 465 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CDC25CP30307 473 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 GRIK1P39086 918 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CCR2P41597 374 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MAGEA11P43364 429 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 RECQLP46063 649 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 FMO5P49326 533 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 GPR15P49685 360 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SCNN1BP51168 640 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 NDST1P52848 882 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SIGLEC14Q08ET2 396 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 INCA1Q0VD86 236 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 LRMPQ12912 555 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 HTR4Q13639 388 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TEAD2Q15562 447 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ARHGAP15Q53QZ3 475 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAM78AQ5JUQ0 283 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMEM31Q5JXX7 168 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SDHAF4Q5VUM1 108 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SASS6Q6UVJ0 657 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 PARM1Q6UWI2 310 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM67Q6ZTA4 783 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MTSS1LQ765P7 747 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ACOT1Q86TX2 421 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TMC8Q8IU68 726 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM59Q8IWR1 403 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CRYBG2Q8N1P7 616 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SLC44A3Q8N4M1 653 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TTC39CQ8N584 583 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 SHKBP1Q8TBC3 707 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZSCAN18Q8TBC5 510 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 RNF217Q8TC41 542 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRMT2BQ96GJ1 504 aaKnown RBP6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 FAXDC2Q96IV6 333 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MPP4Q96JB8 637 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 CEP295NLQ96MC4 621 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZSWIM3Q96MP5 696 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MED15Q96RN5 788 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 MED10Q9BTT4 135 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 B3GNT5Q9BYG0 378 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
HMGB1P42-201ENST00000532126 ZNF518BQ9C0D4 1074 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms