RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 B4DGG1 531 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 THAP12O43422 761 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 PQBP1O60828 265 aaKnown RBP3.85□□□□□ -1.79
ATM-217ENST00000531957 CBFA2T3O75081 653 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 IL18RAPO95256 599 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 CD63P08962 238 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 CCKARP32238 428 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 PIK3CBP42338 1070 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 NANOS2P60321 138 aaKnown RBP3.85□□□□□ -1.79
ATM-217ENST00000531957 TWIST1Q15672 202 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 CNGA3Q16281 694 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 ABLIM2Q6H8Q1 611 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 KIAA1161Q6NSJ0 714 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 RBM44Q6ZP01 1051 aaKnown RBP3.85□□□□□ -1.79
ATM-217ENST00000531957 PIM3Q86V86 326 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 CCDC33Q8N5R6 958 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 CAMK1GQ96NX5 476 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 FAM234AQ9H0X4 552 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 VPS33BQ9H267 617 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 ASNSD1Q9NWL6 643 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 COG5Q9UP83 839 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 LRP12Q9Y561 859 aa3.85□□□□□ -1.79
ATM-217ENST00000531957 A0A1W2PPC1 479 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 POM121BA6NF01 834 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 PRYO14603 147 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 TULP3O75386 442 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 ALADP13716 330 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 RPL17P18621 184 aaKnown RBP3.84□□□□□ -1.79
ATM-217ENST00000531957 RPS6KB1P23443 525 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 KCNJ12Q14500 433 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 TMEM196Q5HYL7 178 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 FAXCQ5TGI0 409 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 ZNF549Q6P9A3 640 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 FAM57BQ71RH2 274 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 KRT28Q7Z3Y7 464 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 UBE2Q1Q7Z7E8 422 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 MMP21Q8N119 569 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 AKAP1Q92667 903 aaKnown RBP eCLIP3.84□□□□□ -1.79
ATM-217ENST00000531957 WDR24Q96S15 920 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 MOV10Q9HCE1 1003 aaKnown RBP3.84□□□□□ -1.79
ATM-217ENST00000531957 KLHL42Q9P2K6 505 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 SPATA31A1Q5TZJ5 1347 aa3.84□□□□□ -1.79
ATM-217ENST00000531957 FOXN3O00409 490 aaPredicted RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 CCNT2O60583 730 aaKnown RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 UGDHO60701 494 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 COQ9O75208 318 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 OAZ2O95190 189 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 FGF2P09038 288 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 FGFR2P21802 821 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 MST1P26927 711 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 NDUFS1P28331 727 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 IGHMBP2P38935 993 aaKnown RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 THBS3P49746 956 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 DGKQP52824 942 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 B4GALNT1Q00973 533 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 ZNF543Q08ER8 600 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 RAP1GAP2Q684P5 730 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 KYAT3Q6YP21 454 aaKnown RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 C9orf47Q6ZRZ4 202 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 MEPCEQ7L2J0 689 aaKnown RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 CCDC28AQ8IWP9 274 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 ADGRF4Q8IZF3 695 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 KRT78Q8N1N4 520 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 PELI3Q8N2H9 469 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 ATP11CQ8NB49 1132 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 ACRBPQ8NEB7 543 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 ABHD5Q8WTS1 349 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 CELF1Q92879 486 aaKnown RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 SLC25A28Q96A46 364 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 MARK4Q96L34 752 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 NLRP4Q96MN2 994 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 GATA5Q9BWX5 397 aaPredicted RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 ZBTB26Q9HCK0 441 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 SEMA4BQ9NPR2 832 aaPredicted RBP3.83□□□□□ -1.8
ATM-217ENST00000531957 MSRB1Q9NZV6 116 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 FAM50BQ9Y247 325 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 TTC3P53804 2025 aa3.83□□□□□ -1.8
ATM-217ENST00000531957 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 TMEM272A0A1B0GTI8 110 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 CLCA1A8K7I4 914 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ZNF814B7Z6K7 855 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ZSCAN9O15535 394 aaPredicted RBP3.82□□□□□ -1.8
ATM-217ENST00000531957 NDST3O95803 873 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 SLC3A2P08195 630 aaKnown RBP3.82□□□□□ -1.8
ATM-217ENST00000531957 TSHRP16473 764 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ELF2Q15723 593 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ODF3L2Q3SX64 289 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ARHGAP15Q53QZ3 475 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 DAB2IPQ5VWQ8 1189 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 FAM90A2PQ658T7 463 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 RFX6Q8HWS3 928 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 FMNL3Q8IVF7 1028 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 RNF152Q8N8N0 203 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ASB5Q8WWX0 329 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 TMOD4Q9NZQ9 345 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 ZNF112Q9UJU3 913 aa3.82□□□□□ -1.8
ATM-217ENST00000531957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.81□□□□□ -1.8
ATM-217ENST00000531957 NDUFB8O95169 186 aa3.81□□□□□ -1.8
ATM-217ENST00000531957 PECAM1P16284 738 aaPredicted RBP3.81□□□□□ -1.8
ATM-217ENST00000531957 DUSP1P28562 367 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms