RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 CCDC196A0A1B0GTZ2 297 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 A6NCN8 305 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 E7ENX8 843 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 H0Y3Z8 333 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 K7ENM7 598 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 DCLK1O15075 740 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 TP73O15350 636 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 FIBPO43427 364 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 TBX18O95935 607 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 MST1P26927 711 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 TFF2Q03403 129 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 TAP2Q03519 686 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 CHRNDQ07001 517 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 SLC10A2Q12908 348 aaPredicted RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 EIF2B5Q13144 721 aaKnown RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 SLC12A1Q13621 1099 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 ATP1A4Q13733 1029 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 HLXQ14774 488 aaPredicted RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 MGAT5BQ3V5L5 792 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 PREPLQ4J6C6 727 aaPredicted RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 MTX3Q5HYI7 312 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 GPATCH4Q5T3I0 446 aaKnown RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 MANEALQ5VSG8 457 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 TTLL5Q6EMB2 1281 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 C16orf54Q6UWD8 224 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 RRAGAQ7L523 313 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 NSUN7Q8NE18 718 aaKnown RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 CSGALNACT1Q8TDX6 532 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 CENPIQ92674 756 aaPredicted RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 ERP27Q96DN0 273 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 RRP36Q96EU6 259 aaKnown RBP4.98□□□□□ -1.61
USP47-211ENST00000531513 HAPLN3Q96S86 360 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 EPS8L2Q9H6S3 715 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 PLEKHA5Q9HAU0 1116 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 PREBQ9HCU5 417 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 SHOC2Q9UQ13 582 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 HPSEQ9Y251 543 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 CDY1Q9Y6F8 540 aa4.98□□□□□ -1.61
USP47-211ENST00000531513 WDR27A2RRH5 827 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 VWC2LB2RUY7 222 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 F5H0A9 414 aaPredicted RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 POLRMTO00411 1230 aaKnown RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 CCNT2O60583 730 aaKnown RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 PIAS2O75928 621 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 ATXN1LP0C7T5 689 aaKnown RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 RXRAP19793 462 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 KLRK1P26718 216 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 LRPAP1P30533 357 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 TOB1P50616 345 aaPredicted RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 HNRNPMP52272 730 aaKnown RBP eCLIP4.97□□□□□ -1.61
USP47-211ENST00000531513 SSBP2P81877 361 aaPredicted RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 SATB1Q01826 763 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 PIGFQ07326 219 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 PRKG2Q13237 762 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 ZIK1Q3SY52 487 aaPredicted RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 CACHD1Q5VU97 1274 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 CCDC30Q5VVM6 783 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 SPATA1Q5VX52 437 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 ZNF626Q68DY1 528 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 NFRKBQ6P4R8 1299 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 ZNF782Q6ZMW2 699 aaPredicted RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 BBS12Q6ZW61 710 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 RAB11FIP2Q7L804 512 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 ANKS1BQ7Z6G8 1248 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 ZNF280BQ86YH2 543 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 TMEM57Q8N5G2 664 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 C1orf131Q8NDD1 294 aaKnown RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 NGDNQ8NEJ9 315 aaKnown RBP4.97□□□□□ -1.61
USP47-211ENST00000531513 POC1BQ8TC44 478 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 BPIFB1Q8TDL5 484 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 RFFLQ8WZ73 363 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 SNX19Q92543 992 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 PPP2R3CQ969Q6 453 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 TWNKQ96RR1 684 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 SMOQ99835 787 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 TTYH3Q9C0H2 523 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 SLC25A32Q9H2D1 315 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 DAPP1Q9UN19 280 aa4.97□□□□□ -1.61
USP47-211ENST00000531513 A0A087X0M5 115 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 A0A1B0GX30 115 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 GCOM1H8Y6P7 765 aaPredicted RBP4.96□□□□□ -1.62
USP47-211ENST00000531513 TOR1BO14657 336 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 RGS10O43665 173 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 URI1O94763 535 aaPredicted RBP4.96□□□□□ -1.62
USP47-211ENST00000531513 RASAL1O95294 804 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 VIPP01282 170 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 PRR35P0CG20 571 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 ARP10275 920 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 DGKEP52429 567 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 KRT17Q04695 432 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 KLF9Q13886 244 aaPredicted RBP4.96□□□□□ -1.62
USP47-211ENST00000531513 FAM153CQ494X1 144 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 TRIM60Q495X7 471 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 TMEM119Q4V9L6 283 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 MAP3K21Q5TCX8 1036 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 C11orf87Q6NUJ2 197 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 RINT1Q6NUQ1 792 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 TAPT1Q6NXT6 567 aa4.96□□□□□ -1.62
USP47-211ENST00000531513 NEK10Q6ZWH5 1172 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms