RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 DUSP16Q9BY84 665 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 ZNF408Q9H9D4 720 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 ZFP69BQ9UJL9 534 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 PCDHA11Q9Y5I1 949 aa17.8■□□□□ 0.44
BRCA2-204ENST00000530893 A0A0A0MRY4 1105 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 HGSO14964 777 aaPredicted RBP17.79■□□□□ 0.44
BRCA2-204ENST00000530893 STK10O94804 968 aaKnown RBP17.79■□□□□ 0.44
BRCA2-204ENST00000530893 MAP3K6O95382 1288 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 LRPAP1P30533 357 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 CRYBB1P53674 252 aaPredicted RBP17.79■□□□□ 0.44
BRCA2-204ENST00000530893 ATXN1P54253 815 aaKnown RBP17.79■□□□□ 0.44
BRCA2-204ENST00000530893 UBXN11Q5T124 520 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 CCNJLQ8IV13 435 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 KCTD13Q8WZ19 329 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 NT5C3BQ969T7 300 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 SPATA13Q96N96 652 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 EIF2B3Q9NR50 452 aaKnown RBP17.79■□□□□ 0.44
BRCA2-204ENST00000530893 LNPEPQ9UIQ6 1025 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 MTO1Q9Y2Z2 717 aaKnown RBP17.79■□□□□ 0.44
BRCA2-204ENST00000530893 HCRTO43612 131 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 NOS2P35228 1153 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 SERPINB4P48594 390 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 CPT1AP50416 773 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 LILRA4P59901 499 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 BNIPLQ7Z465 357 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 TLK2Q86UE8 772 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 PIGZQ86VD9 579 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 RAB3IL1Q8TBN0 382 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 TMEM40Q8WWA1 233 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 PTPRN2Q92932 1015 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 STAP1Q9ULZ2 295 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 TRIM33Q9UPN9 1127 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 STK38LQ9Y2H1 464 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 PLLPQ9Y342 182 aa17.79■□□□□ 0.44
BRCA2-204ENST00000530893 CXorf49A8MYA2 514 aaPredicted RBP17.78■□□□□ 0.44
BRCA2-204ENST00000530893 DNAJC6O75061 913 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 NEFHP12036 1026 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 GOT1P17174 413 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 TARSP26639 723 aaKnown RBP17.78■□□□□ 0.44
BRCA2-204ENST00000530893 PSEN2P49810 448 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 SULT1E1P49888 294 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 MRPS5P82675 430 aaKnown RBP17.78■□□□□ 0.44
BRCA2-204ENST00000530893 PLEKHG4Q58EX7 1191 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 CLNKQ7Z7G1 428 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 DEFB106AQ8N104 65 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 TTC17Q96AE7 1141 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 KATNAL1Q9BW62 490 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 EBF2Q9HAK2 575 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 KLK14Q9P0G3 267 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 HAO1Q9UJM8 370 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 RPL26L1Q9UNX3 145 aaKnown RBP17.78■□□□□ 0.44
BRCA2-204ENST00000530893 IPPQ9Y573 584 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 MAD1L1Q9Y6D9 718 aa17.78■□□□□ 0.44
BRCA2-204ENST00000530893 H3BRJ5 948 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 OPHN1O60890 802 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 RFPL1O75677 317 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 T-ENOLP0DO92 83 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 NPR3P17342 541 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 GLUD2P49448 558 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 AIF1P55008 147 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 TAF1BQ53T94 588 aaPredicted RBP17.77■□□□□ 0.44
BRCA2-204ENST00000530893 ANKRD20A2Q5SQ80 823 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 ZNF618Q5T7W0 954 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 ANKRD20A1Q5TYW2 823 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 ANKRD20A3Q5VUR7 823 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 TIFABQ6ZNK6 161 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 NAT9Q9BTE0 207 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 C12orf65Q9H3J6 166 aaKnown RBP17.77■□□□□ 0.44
BRCA2-204ENST00000530893 ARHGEF4Q9NR80 690 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 MOCS1Q9NZB8 636 aa17.77■□□□□ 0.44
BRCA2-204ENST00000530893 ALDH1A2O94788 518 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 GNAT1P11488 350 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 AMPD1P23109 780 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 ARFIP2P53365 341 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 SOX4Q06945 474 aaPredicted RBP17.77■□□□□ 0.43
BRCA2-204ENST00000530893 ADIGQ0VDE8 80 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 DBN1Q16643 649 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 MORN1Q5T089 497 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 SPRYD7Q5W111 196 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 ATG16L1Q676U5 607 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 STEAP4Q687X5 459 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 MTDHQ86UE4 582 aaKnown RBP17.77■□□□□ 0.43
BRCA2-204ENST00000530893 FAM131BQ86XD5 332 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 AGAP11Q8TF27 550 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 FAM149B1Q96BN6 582 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 SLC7A6OSQ96CW6 309 aaPredicted RBP17.77■□□□□ 0.43
BRCA2-204ENST00000530893 TBC1D31Q96DN5 1066 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 SLC9A7Q96T83 725 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 NPY6RQ99463 290 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 RNF39Q9H2S5 420 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 SMYD2Q9NRG4 433 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 Q9Y3F1 56 aa17.77■□□□□ 0.43
BRCA2-204ENST00000530893 TREHO43280 583 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 PTPN4P29074 926 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
BRCA2-204ENST00000530893 CRHR1P34998 444 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 MAP2K5Q13163 448 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 NAB1Q13506 487 aa17.76■□□□□ 0.43
BRCA2-204ENST00000530893 PDK1Q15118 436 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms