RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ADSLP30566 484 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 BMPR1AP36894 532 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ADAM17P78536 824 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ITGADQ13349 1161 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 TRPC3Q13507 836 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 GRIK5Q16478 980 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 FGD3Q5JSP0 725 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 USP17L1Q7RTZ2 530 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SLC51BQ86UW2 128 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 KATNAL2Q8IYT4 538 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 LSMEM1Q8N8F7 131 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 EXD1Q8NHP7 514 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 FAR2Q96K12 515 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 DHRS9Q9BPW9 319 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 STRA6Q9BX79 667 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 WDR12Q9GZL7 423 aaKnown RBP8.38□□□□□ -1.07
CSDE1-214ENST00000530886 IKZF4Q9H2S9 585 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SMARCAD1Q9H4L7 1026 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 NANOGQ9H9S0 305 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SCUBE2Q9NQ36 999 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 SACM1LQ9NTJ5 587 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 ANGPTL3Q9Y5C1 460 aa8.38□□□□□ -1.07
CSDE1-214ENST00000530886 PLIN4Q96Q06 1357 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 MED24O75448 989 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 C1QAP02745 245 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 NTRK1P04629 796 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 LDHCP07864 332 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 PROZP22891 400 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 BTDP43251 543 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 NAPAP54920 295 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 IKBKEQ14164 716 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 FAM47CQ5HY64 1035 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 C6orf10Q5SRN2 563 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 STXBP5Q5T5C0 1151 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 TWF2Q6IBS0 349 aaKnown RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CCSAPQ6IQ19 270 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 PLEKHA7Q6IQ23 1121 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 REXO1Q8N1G1 1221 aaKnown RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 DPF3Q92784 378 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CCDC124Q96CT7 223 aaKnown RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 RILPQ96NA2 401 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 TCF12Q99081 682 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 AVENQ9NQS1 362 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 SEPT11Q9NVA2 429 aaKnown RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 LRP2BPQ9P2M1 347 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 SEL1LQ9UBV2 794 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 UBE4BO95155 1302 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 STRCQ7RTU9 1775 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 GOLGA8QA0A0J9YX86 632 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 GOLGA8OA6NCC3 632 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 ERVV-1B6SEH8 477 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 GOLGA8NF8WBI6 632 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 GOLGA8RI6L899 631 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 J3QRK9 145 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 BCAS2O75934 225 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 UGT2B4P06133 528 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 MCF2P10911 925 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 NUMBP49757 651 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 TMPRSS15P98073 1019 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CHRNDQ07001 517 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 BNIP3Q12983 259 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 TFDP1Q14186 410 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 HIF1AQ16665 826 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CDONQ4KMG0 1287 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 PIGGQ5H8A4 983 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 MAMDC4Q6UXC1 1216 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 ISLR2Q6UXK2 745 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 DENND5BQ6ZUT9 1274 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 FBXL8Q96CD0 374 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 FEM1CQ96JP0 617 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 EBF4Q9BQW3 602 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 SLC13A1Q9BZW2 595 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 PDZD7Q9H5P4 517 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CAAP1Q9H8G2 361 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 PNPLA8Q9NP80 782 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 ATP11BQ9Y2G3 1177 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 SNCAIPQ9Y6H5 919 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 SMCHD1A6NHR9 2005 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CDK2AP1O14519 115 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 FOXD2O60548 495 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CPNE6O95741 557 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CYP19A1P11511 503 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 ATF7P17544 494 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 EPHA3P29320 983 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CACNB1Q02641 598 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 C1orf220Q5T0J3 134 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CCNJQ5T5M9 372 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 C16orf89Q6UX73 402 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 GRIN3AQ8TCU5 1115 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 CLSTN3Q9BQT9 956 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 MARCH7Q9H992 704 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 COPS7BQ9H9Q2 264 aaPredicted RBP8.37□□□□□ -1.07
CSDE1-214ENST00000530886 PCDH9Q9HC56 1237 aa8.37□□□□□ -1.07
CSDE1-214ENST00000530886 KIAA1024Q9UPX6 916 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms