RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 HDAC7Q8WUI4 952 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 OVCA2Q8WZ82 227 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 CENPIQ92674 756 aaPredicted RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 CD101Q93033 1021 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 NT5C3BQ969T7 300 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 WBP2Q969T9 261 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 CAPZA3Q96KX2 299 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 SNRNP25Q9BV90 132 aaKnown RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 TRIM62Q9BVG3 475 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 WDR6Q9NNW5 1121 aaKnown RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 GKN1Q9NS71 199 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
SOX6-213ENST00000530378 CLEC1BQ9P126 229 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 MRPS23Q9Y3D9 190 aaKnown RBP11.08□□□□□ -0.64
SOX6-213ENST00000530378 JRKLQ9Y4A0 524 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 DOCK8Q8NF50 2099 aa11.08□□□□□ -0.64
SOX6-213ENST00000530378 H3BQ06 376 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 ZNF185O15231 689 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 OAS1P00973 400 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 IGLV3-25P01717 112 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 CD48P09326 243 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 SP100P23497 879 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 CTNNA1P35221 906 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 ATP5C1P36542 298 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 SLC1A1P43005 524 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 TBX4P57082 545 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 ADAM15Q13444 863 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 PPP6R3Q5H9R7 873 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 SND1Q7KZF4 910 aaKnown RBP eCLIP11.07□□□□□ -0.64
SOX6-213ENST00000530378 STRADAQ7RTN6 431 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 CCDC50Q8IVM0 306 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 RHOT1Q8IXI2 618 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 DEFB123Q8N688 67 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 RNF25Q96BH1 459 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 HES6Q96HZ4 224 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 SERPINB11Q96P15 392 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 CDX2Q99626 313 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 TKTL2Q9H0I9 626 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 DNMT3LQ9UJW3 386 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 LRRD1A4D1F6 860 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 RARAP10276 462 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 HDCP19113 662 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 GBP1P32455 592 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 LTBRP36941 435 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 EPHA5P54756 1037 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 HADHQ16836 314 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 PRSS36Q5K4E3 855 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 BNIPLQ7Z465 357 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 UBL4BQ8N7F7 174 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 RAPGEF5Q92565 580 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 CALR3Q96L12 384 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 FCRL2Q96LA5 508 aaPredicted RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 ZSWIM3Q96MP5 696 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 GUCD1Q96NT3 240 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 SLC46A2Q9BY10 475 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 SIK2Q9H0K1 926 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 DHX35Q9H5Z1 703 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 OLA1Q9NTK5 396 aaKnown RBP11.07□□□□□ -0.64
SOX6-213ENST00000530378 LMCD1Q9NZU5 365 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 AP4E1Q9UPM8 1137 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 CCL26Q9Y258 94 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 CPQQ9Y646 472 aa11.07□□□□□ -0.64
SOX6-213ENST00000530378 NUP210Q8TEM1 1887 aaPredicted RBP11.06□□□□□ -0.64
SOX6-213ENST00000530378 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 TRAV19A0A0A6YYK7 116 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 PSTPIP1O43586 416 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 URI1O94763 535 aaPredicted RBP11.06□□□□□ -0.64
SOX6-213ENST00000530378 C1RP00736 705 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 FOSL2P15408 326 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 CTNNA2P26232 953 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 PCK1P35558 622 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 CXCR3P49682 368 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 ZXDBP98169 803 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 KRT81Q14533 505 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 ARHGAP15Q53QZ3 475 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 SNX30Q5VWJ9 437 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 BEND5Q7L4P6 421 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 ANKS1BQ7Z6G8 1248 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 ADAT2Q7Z6V5 191 aaKnown RBP11.06□□□□□ -0.64
SOX6-213ENST00000530378 GPR149Q86SP6 731 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 MS4A14Q96JA4 679 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
SOX6-213ENST00000530378 OSBPL9Q96SU4 736 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 CALN1Q9BXU9 219 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 WDCPQ9H6R7 721 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 RRN3Q9NYV6 651 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 SNX12Q9UMY4 172 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 PCDHA3Q9Y5H8 950 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 MYOFQ9NZM1 2061 aa11.06□□□□□ -0.64
SOX6-213ENST00000530378 CCDC66A2RUB6 948 aa11.05□□□□□ -0.64
SOX6-213ENST00000530378 MIF4GDA9UHW6 222 aaKnown RBP11.05□□□□□ -0.64
SOX6-213ENST00000530378 FAM72CH0Y354 149 aa11.05□□□□□ -0.64
SOX6-213ENST00000530378 KIF2AO00139 706 aaPredicted RBP11.05□□□□□ -0.64
SOX6-213ENST00000530378 CEP104O60308 925 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms