RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PNKPQ96T60 521 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 PCDHB18PQ96TA0 734 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 BBS2Q9BXC9 721 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TTYH3Q9C0H2 523 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 STOML2Q9UJZ1 356 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 TLR6Q9Y2C9 796 aa13.21□□□□□ -0.29
CCDC90B-216ENST00000529856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 NEDD8-MDP1E9PL57 170 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 K7EQS6 105 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 HAX1O00165 279 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 LAMTOR5O43504 91 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 TULP3O75386 442 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 GRAP2O75791 330 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 LATS1O95835 1130 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 TRUB2O95900 331 aaKnown RBP13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 UNGP13051 313 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 TYRP14679 529 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 SCNN1AP37088 669 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 ZNF445P59923 1031 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 EIF4EBP2Q13542 120 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 DCAF6Q58WW2 860 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 ADGRF1Q5T601 910 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 NUGGCQ68CJ6 796 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 XYLT1Q86Y38 959 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 PHTF2Q8N3S3 785 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 NAT16Q8N8M0 369 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 MSANTD4Q8NCY6 345 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 ADAM32Q8TC27 787 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 AZIN2Q96A70 460 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 P2RY11Q96G91 374 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC39A13Q96H72 371 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 FCRL2Q96LA5 508 aaPredicted RBP13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 NUP58Q9BVL2 599 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 FBXO4Q9UKT5 387 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 ATG2BQ96BY7 2078 aa13.2□□□□□ -0.3
CCDC90B-216ENST00000529856 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM170AA1A519 330 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 LRRC53A6NM62 1247 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 GFRA2O00451 464 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CACNG3O60359 315 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 RNF40O75150 1001 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 KAT7O95251 611 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 PENKP01210 267 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 APODP05090 189 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 MMP8P22894 467 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 GRIA2P42262 883 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CXCL12P48061 93 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CCR3P51677 355 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 PITX1P78337 314 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CDK17Q00537 523 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 MESP2Q0VG99 397 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CLEC16AQ2KHT3 1053 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 PREPLQ4J6C6 727 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 C2CD6Q53TS8 623 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 SFMBT2Q5VUG0 894 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 XPO6Q96QU8 1125 aaKnown RBP13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 PRMT8Q9NR22 394 aaPredicted RBP13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 ARHGEF4Q9NR80 690 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 PLK2Q9NYY3 685 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 DEC1Q9P2X7 70 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 FBXO10Q9UK96 956 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
CCDC90B-216ENST00000529856 CHURC1-FNTBB4DL54 471 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 TRIM24O15164 1050 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 IRAK2O43187 625 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 ACSL4O60488 711 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 ATG13O75143 517 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 DAB1O75553 588 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 CYBBP04839 570 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 CISD3P0C7P0 127 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 SP9P0CG40 484 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 GBP1P32455 592 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 NOS2P35228 1153 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 MATKP42679 507 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 TNFRSF4P43489 277 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC11A2P49281 568 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 RNASE9P60153 205 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 NHLH1Q02575 133 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 CENPCQ03188 943 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 CSTF1Q05048 431 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 KDSRQ06136 332 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 ZNF528Q3MIS6 628 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 FAM102AQ5T9C2 384 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 PKN3Q6P5Z2 889 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 MMS22LQ6ZRQ5 1243 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 SLC30A5Q8TAD4 765 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 ATOH1Q92858 354 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 BHMTQ93088 406 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 XPO4Q9C0E2 1151 aaKnown RBP13.18□□□□□ -0.3
CCDC90B-216ENST00000529856 DNAJC17Q9NVM6 304 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms