RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FBXO2Q9UK22 296 aaPredicted RBP9.47□□□□□ -0.89
VPS11-203ENST00000529545 SLC27A6Q9Y2P4 619 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 CLIC4Q9Y696 253 aa9.47□□□□□ -0.89
VPS11-203ENST00000529545 VPS37CA5D8V6 355 aaPredicted RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 KCNJ18B7U540 433 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 RRP8O43159 456 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 GREM1O60565 184 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 IGLV3-19P01714 112 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 CYBBP04839 570 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 RARGP13631 454 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 ACO1P21399 889 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 HNF1BP35680 557 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 IL12RB1P42701 662 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 CCT8P50990 548 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 AP3M2P53677 418 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 MAP3K7CLP57077 242 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 SNRPFP62306 86 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 AMPD3Q01432 767 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 BNC1Q01954 994 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 ORC1Q13415 861 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 EIF4HQ15056 248 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 SMAD1Q15797 465 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 KIF19Q2TAC6 998 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 C10orf120Q5SQS8 335 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 KLHDC10Q6PID8 442 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 SERPINA13PQ6UXR4 307 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 PAQR9Q6ZVX9 377 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 ANKS1BQ7Z6G8 1248 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 ADAT2Q7Z6V5 191 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 FAM124AQ86V42 546 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 TMPRSS12Q86WS5 348 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 MARCH9Q86YJ5 346 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 PIP4K2CQ8TBX8 421 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 NXPE2Q96DL1 559 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 CLIC6Q96NY7 704 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 CDK5RAP1Q96SZ6 601 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 TRIM9Q9C026 710 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 DCLK3Q9C098 648 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 DNAI2Q9GZS0 605 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 XYLT2Q9H1B5 865 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 SMYD3Q9H7B4 428 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 AGPAT3Q9NRZ7 376 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 PPP4R2Q9NY27 417 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 FTSJ1Q9UET6 329 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 FBXO10Q9UK96 956 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 SCML2Q9UQR0 700 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 ANKRD6Q9Y2G4 727 aa9.46□□□□□ -0.9
VPS11-203ENST00000529545 GOLGA4Q13439 2230 aaKnown RBP9.46□□□□□ -0.9
VPS11-203ENST00000529545 CAPN9O14815 690 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CLIC2O15247 247 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 TIMM44O43615 452 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 PCDHGA12O60330 932 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 DFNA5O60443 496 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 EPHX1P07099 455 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 FAM200BP0CF97 657 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 RALAP11233 206 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CDK4P11802 303 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CCDC130P13994 396 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 JUPP14923 745 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 GRIA4P48058 902 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 PGFP49763 221 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 MFAP3P55082 362 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 ASIC1P78348 528 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 COG7P83436 770 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CEBPZQ03701 1054 aaKnown RBP9.45□□□□□ -0.9
VPS11-203ENST00000529545 ENPP2Q13822 863 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 ZNF234Q14588 700 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 GEN1Q17RS7 908 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 SCARA5Q6ZMJ2 495 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 Q6ZNB5 142 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 ZNF605Q86T29 641 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CACUL1Q86Y37 369 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 PDILTQ8N807 584 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 C1orf216Q8TAB5 229 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 SLC2A14Q8TDB8 520 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 HPS3Q969F9 1004 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 IGSF8Q969P0 613 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 JAKMIP2Q96AA8 810 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CRELD1Q96HD1 420 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 SMOQ99835 787 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
VPS11-203ENST00000529545 CIPCQ9C0C6 399 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 LHX5Q9H2C1 402 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 TNMDQ9H2S6 317 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CSNK1G1Q9HCP0 422 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 ELOVL2Q9NXB9 296 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 CGNQ9P2M7 1197 aaKnown RBP9.45□□□□□ -0.9
VPS11-203ENST00000529545 NAGPAQ9UK23 515 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 BTBD3Q9Y2F9 522 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 PCDHA5Q9Y5H7 936 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 SNX11Q9Y5W9 270 aa9.45□□□□□ -0.9
VPS11-203ENST00000529545 FLNBO75369 2602 aaKnown RBP9.45□□□□□ -0.9
VPS11-203ENST00000529545 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
VPS11-203ENST00000529545 A0A1W2PQH9 124 aa9.44□□□□□ -0.9
VPS11-203ENST00000529545 MDM4O15151 490 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms