RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 FBXO42Q6P3S6 717 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 CNBD1Q8NA66 436 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 MYCBPAPQ8TBZ2 947 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PARD3BQ8TEW8 1205 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 FAM136AQ96C01 138 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PGBD1Q96JS3 809 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 CCDC138Q96M89 665 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PLEKHF1Q96S99 279 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 PPP1R9BQ96SB3 815 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 TRIM5Q9C035 493 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 FAM83DQ9H4H8 585 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 NLRC4Q9NPP4 1024 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 BABAM1Q9NWV8 329 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 COX11Q9Y6N1 276 aa5.62□□□□□ -1.51
CSDE1-212ENST00000529046 TNRC6CQ9HCJ0 1690 aaKnown RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 AFDNP55196 1824 aaKnown RBP5.62□□□□□ -1.51
CSDE1-212ENST00000529046 MPPED1O15442 326 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 NCK2O43639 380 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 INMTO95050 263 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 MYL3P08590 195 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 IL1R2P27930 398 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 ALDH1B1P30837 517 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 FOLR3P41439 243 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 PTH2RP49190 550 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 ATXN1P54253 815 aaKnown RBP5.61□□□□□ -1.51
CSDE1-212ENST00000529046 SCN7AQ01118 1682 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 ZNF750Q32MQ0 723 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 CRY2Q49AN0 593 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 RIC1Q4ADV7 1423 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 HIBCHQ6NVY1 386 aaPredicted RBP5.61□□□□□ -1.51
CSDE1-212ENST00000529046 SYCE2Q6PIF2 218 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 LAYNQ6UX15 382 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 SRLQ86TD4 932 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 YAF2Q8IY57 180 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 MPP5Q8N3R9 675 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 BOLLQ8N9W6 283 aaKnown RBP5.61□□□□□ -1.51
CSDE1-212ENST00000529046 BPIFB1Q8TDL5 484 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 NELL1Q92832 810 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 IQCDQ96DY2 449 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 ADGRA2Q96PE1 1338 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 MID2Q9UJV3 735 aa5.61□□□□□ -1.51
CSDE1-212ENST00000529046 VIRMAQ69YN4 1812 aaKnown RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 WDR90Q96KV7 1748 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 IBTKQ9P2D0 1353 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 VWC2LB2RUY7 222 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 MASP2O00187 686 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 MGST3O14880 152 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 RRP9O43818 475 aaKnown RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 IFIT2P09913 472 aaKnown RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 CD38P28907 300 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 PCSK6P29122 969 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 RARRES1P49788 294 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 CPT1AP50416 773 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 ELLP55199 621 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 MRPS21P82921 87 aaKnown RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 BTKQ06187 659 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 ARHGEF7Q14155 803 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 E2F2Q14209 437 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 CCDC142Q17RM4 750 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 FAM209BQ5JX69 171 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 KLHDC7AQ5VTJ3 777 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 MCM10Q7L590 875 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 NBPF5PQ86XG9 351 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 FAM186BQ8IYM0 893 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 SPICE1Q8N0Z3 855 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 CYP2W1Q8TAV3 490 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 IPCEF1Q8WWN9 437 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 ZNF622Q969S3 477 aaKnown RBP eCLIP5.6□□□□□ -1.51
CSDE1-212ENST00000529046 PDLIM2Q96JY6 352 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 SELENOOQ9BVL4 669 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 VPS33BQ9H267 617 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 TAOK3Q9H2K8 898 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 KLC4Q9NSK0 619 aa5.6□□□□□ -1.51
CSDE1-212ENST00000529046 hCG_1984214I3L0E3 225 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 APOL1O14791 398 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 YY2O15391 372 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 THAP12O43422 761 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 PDE6CP51160 858 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 EIF4A1P60842 406 aaKnown RBP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 TIAL1Q01085 375 aaKnown RBP eCLIP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 SATB1Q01826 763 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 PMS2P11Q13670 270 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 SLC29A2Q14542 456 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 SLC35G1Q2M3R5 365 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 ARHGAP40Q5TG30 622 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 PLAG1Q6DJT9 500 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 RGS7BPQ6MZT1 257 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 XRRA1Q6P2D8 792 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 BEND5Q7L4P6 421 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 FANCBQ8NB91 859 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 FAM98AQ8NCA5 519 aaKnown RBP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 NTN5Q8WTR8 489 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-212ENST00000529046 ATG4AQ8WYN0 398 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 RFKQ969G6 155 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 VOPP1Q96AW1 172 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 TNIP3Q96KP6 325 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 PSMD1Q99460 953 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 ALG8Q9BVK2 526 aa5.59□□□□□ -1.51
CSDE1-212ENST00000529046 STK31Q9BXU1 1019 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms