RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 POLE2P56282 527 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 TSPY1Q01534 308 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 ADCY1Q08828 1119 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 IKBKEQ14164 716 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 HLTFQ14527 1009 aaKnown RBP eCLIP13.27□□□□□ -0.29
ATG13-211ENST00000528494 DBN1Q16643 649 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 HFE2Q6ZVN8 426 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 SLC26A9Q7LBE3 791 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 CRIPAKQ8N1N5 446 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 VWCEQ96DN2 955 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 PGLYRP2Q96PD5 576 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.27□□□□□ -0.29
ATG13-211ENST00000528494 SAMD15Q9P1V8 674 aa13.27□□□□□ -0.29
ATG13-211ENST00000528494 UTP11Q9Y3A2 253 aaKnown RBP13.27□□□□□ -0.29
ATG13-211ENST00000528494 CSF2RAP15509 400 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 CYP2F1P24903 491 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 PCK1P35558 622 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 CETN2P41208 172 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 PITX1P78337 314 aaPredicted RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 MRPS5P82675 430 aaKnown RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 KLF1Q13351 362 aaPredicted RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 ACBD5Q5T8D3 534 aaPredicted RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 STKLD1Q8NE28 680 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 ZNF317Q96PQ6 595 aaPredicted RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 MAGEB5Q9BZ81 275 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 FAM129AQ9BZQ8 928 aa13.26□□□□□ -0.29
ATG13-211ENST00000528494 MMADHCQ9H3L0 296 aaPredicted RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 DDX56Q9NY93 547 aaKnown RBP13.26□□□□□ -0.29
ATG13-211ENST00000528494 TRIM43BA6NCK2 446 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 C3orf70A6NLC5 250 aaPredicted RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 YJEFN3A6XGL0 299 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 E7ENQ6 273 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 ACRP10323 421 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 TYMPP19971 482 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 KDELR1P24390 212 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 CDKN2BP42772 138 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 MSH2P43246 934 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 TUBP50607 506 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 HDAC4P56524 1084 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 NCALDP61601 193 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 YWHAZP63104 245 aaKnown RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 MMRN1Q13201 1228 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 ACAP1Q15027 740 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 TRIP13Q15645 432 aaPredicted RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 TFDP3Q5H9I0 405 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 EFHC1Q5JVL4 640 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 SYPL2Q5VXT5 272 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 JAMLQ86YT9 394 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 SPATA2LQ8IUW3 424 aaPredicted RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 EIF1ADQ8N9N8 165 aaKnown RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 MIPOL1Q8TD10 442 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 ECT2Q9H8V3 914 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 DNAAF2Q9NVR5 837 aaKnown RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 ABI2Q9NYB9 513 aaPredicted RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.25□□□□□ -0.29
ATG13-211ENST00000528494 TTC3P53804 2025 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 MAP3K13O43283 966 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 GRIK1P39086 918 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 PTGIRP43119 386 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 CDH6P55285 790 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 CYP4V2Q6ZWL3 525 aaPredicted RBP13.25□□□□□ -0.29
ATG13-211ENST00000528494 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 SCAMP5Q8TAC9 235 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 ADAM32Q8TC27 787 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 KCTD13Q8WZ19 329 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 KLHL29Q96CT2 875 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 TBCBQ99426 244 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 PKMYT1Q99640 499 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 CYLDQ9NQC7 956 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 MARCH5Q9NX47 278 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 NAALADL1Q9UQQ1 740 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 SNX24Q9Y343 169 aa13.25□□□□□ -0.29
ATG13-211ENST00000528494 hCG_1818297A0A087WSY0 165 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 ARHGEF37A1IGU5 675 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 A8MUI8 341 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 TJP3O95049 919 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 GALTP07902 379 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 KRT16P08779 473 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 HSPA1AP0DMV8 641 aaKnown RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 HSPA1BP0DMV9 641 aaKnown RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 SCNN1BP51168 640 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 NME3Q13232 169 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 UAP1Q16222 522 aaPredicted RBP13.24□□□□□ -0.29
ATG13-211ENST00000528494 PPP2R5EQ16537 467 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 CYP1B1Q16678 543 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 SDHAF4Q5VUM1 108 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 TMEM154Q6P9G4 183 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 PRUNE1Q86TP1 453 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 SCN4BQ8IWT1 228 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 MAIP1Q8WWC4 291 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 EDEM1Q92611 657 aa13.24□□□□□ -0.29
ATG13-211ENST00000528494 TMEM106CQ9BVX2 250 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms