RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 CLDN10P78369 228 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 E2F4Q16254 413 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 Q6ZNB5 142 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 CLEC20AQ6ZU45 233 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 CCDC186Q7Z3E2 898 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 FAM124AQ86V42 546 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 DDI1Q8WTU0 396 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 HNRNPABQ99729 332 aaKnown RBP12.13□□□□□ -0.47
CMTM1-211ENST00000528484 SLC2A11Q9BYW1 496 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 SDCBP2Q9H190 292 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 IL21RQ9HBE5 538 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 FAM13BQ9NYF5 915 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
CMTM1-211ENST00000528484 FNDC3AQ9Y2H6 1198 aaKnown RBP12.13□□□□□ -0.47
CMTM1-211ENST00000528484 BPTFQ12830 3046 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 PLXNB3Q9ULL4 1909 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 E9PAM4 449 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
CMTM1-211ENST00000528484 TNFSF14O43557 240 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 CUTAO60888 179 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 PENKP01210 267 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-211ENST00000528484 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 HMBSP08397 361 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 PGFP49763 221 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 CCT8P50990 548 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 EFEMP1Q12805 493 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 ZNF234Q14588 700 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-211ENST00000528484 FNDC3BQ53EP0 1204 aaKnown RBP12.12□□□□□ -0.47
CMTM1-211ENST00000528484 CCDC157Q569K6 752 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 FYB2Q5VWT5 728 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 GPRIN1Q7Z2K8 1008 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 CEP57L1Q8IYX8 460 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 ZNF276Q8N554 614 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 PDCD7Q8N8D1 485 aaKnown RBP12.12□□□□□ -0.47
CMTM1-211ENST00000528484 OR2T3Q8NH03 318 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 SKA1Q96BD8 255 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 LHX5Q9H2C1 402 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 FBRSQ9HAH7 460 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 CYP3A43Q9HB55 503 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 NMUR1Q9HB89 426 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 OSER1Q9NX31 292 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 HMGXB4Q9UGU5 601 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
CMTM1-211ENST00000528484 PTPRBP23467 1997 aa12.12□□□□□ -0.47
CMTM1-211ENST00000528484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 TRABD2BA6NFA1 517 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 IKBKBO14920 756 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 DFNA5O60443 496 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 VNN1O95497 513 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ASS1P00966 412 aaKnown RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 DNTTP04053 509 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ATXN1LP0C7T5 689 aaKnown RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 HNF1BP35680 557 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ABCG1P45844 678 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 GRIA4P48058 902 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 CSNK1EP49674 416 aaKnown RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 KIF11P52732 1056 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ZNF445P59923 1031 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 SFSWAPQ12872 951 aaKnown RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ENPP2Q13822 863 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ZACNQ401N2 412 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 CEP135Q66GS9 1140 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 DENND1CQ8IV53 801 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 SCUBE3Q8IX30 993 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 BAHD1Q8TBE0 780 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 WFIKKN2Q8TEU8 576 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 IGSF8Q969P0 613 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 BTBD1Q9H0C5 482 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 GZF1Q9H116 711 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-211ENST00000528484 BLZF1Q9H2G9 400 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 FTSJ1Q9UET6 329 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 CABIN1Q9Y6J0 2220 aa12.11□□□□□ -0.47
CMTM1-211ENST00000528484 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 CALUO43852 315 aaPredicted RBP12.1□□□□□ -0.47
CMTM1-211ENST00000528484 YEATS4O95619 227 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 SEMA4FO95754 770 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 HLA-DRAP01903 254 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 CDK4P11802 303 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 HLA-EP13747 358 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 CD58P19256 250 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 PRKCHP24723 683 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 AFMP43652 599 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 ASPAP45381 313 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 COPAP53621 1224 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 BCAT1P54687 386 aa12.1□□□□□ -0.47
CMTM1-211ENST00000528484 C21orf59P57076 290 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms