RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 AWAT1Q58HT5 328 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 C10orf62Q5T681 223 aaPredicted RBP6.69□□□□□ -1.34
PCF11-202ENST00000528336 ZNF280DQ6N043 979 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 TMEM65Q6PI78 240 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 TTC30AQ86WT1 665 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 MYLK4Q86YV6 388 aaPredicted RBP6.69□□□□□ -1.34
PCF11-202ENST00000528336 HASPINQ8TF76 798 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 STYXQ8WUJ0 223 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 EDC3Q96F86 508 aaKnown RBP6.69□□□□□ -1.34
PCF11-202ENST00000528336 VPS45Q9NRW7 570 aa6.69□□□□□ -1.34
PCF11-202ENST00000528336 GOLGA6L3A6NEY3 463 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 TISP43B9A030 160 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 POC1B-GALNT4F8VUJ3 575 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 ZNF500O60304 480 aaPredicted RBP6.68□□□□□ -1.34
PCF11-202ENST00000528336 NHLH1Q02575 133 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 CFHR3Q02985 330 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 TRIM14Q14142 442 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 KCNJ12Q14500 433 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 PUM3Q15397 648 aaKnown RBP6.68□□□□□ -1.34
PCF11-202ENST00000528336 ELF2Q15723 593 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 TMEM95Q3KNT9 176 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 TLDC1Q6P9B6 456 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 DCDC5Q6ZRR9 648 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 GALNT4Q8N4A0 578 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.68□□□□□ -1.34
PCF11-202ENST00000528336 ADAMTS18Q8TE60 1221 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 RITA1Q96K30 269 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 ASB2Q96Q27 587 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 CINPQ9BW66 212 aaPredicted RBP6.68□□□□□ -1.34
PCF11-202ENST00000528336 TMEM8AQ9HCN3 771 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 FSCN3Q9NQT6 498 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 HELLSQ9NRZ9 838 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 CA14Q9ULX7 337 aa6.68□□□□□ -1.34
PCF11-202ENST00000528336 LGALS16A8MUM7 142 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 PRRT4C9JH25 899 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 UBE2Q2LH0YL09 131 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 CLIC1O00299 241 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 PCDH17O14917 1159 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 FYB1O15117 783 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 NTSR2O95665 410 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 ALADP13716 330 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 GALNSP34059 522 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 TUBA4AP68366 448 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 LMOD3Q0VAK6 560 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 DNASE1L3Q13609 305 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 RAPGEF1Q13905 1077 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 SPARCL1Q14515 664 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 MFSD13AQ14CX5 517 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 PFKFB4Q16877 469 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 CCDC144NLQ6NUI1 221 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 ZNF782Q6ZMW2 699 aaPredicted RBP6.67□□□□□ -1.34
PCF11-202ENST00000528336 PIK3AP1Q6ZUJ8 805 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 SEMA6DQ8NFY4 1073 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 DPF1Q92782 380 aa6.67□□□□□ -1.34
PCF11-202ENST00000528336 ZNF764Q96H86 408 aaPredicted RBP6.67□□□□□ -1.34
PCF11-202ENST00000528336 FYTTD1Q96QD9 318 aaKnown RBP6.67□□□□□ -1.34
PCF11-202ENST00000528336 POLA1P09884 1462 aaPredicted RBP6.66□□□□□ -1.34
PCF11-202ENST00000528336 IFT140Q96RY7 1462 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 LINC01548A6NM66 108 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 ASNA1O43681 348 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 RBMXL2O75526 392 aaKnown RBP6.66□□□□□ -1.34
PCF11-202ENST00000528336 TAF5LO75529 589 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 TNFRSF6BO95407 300 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 PRKCGP05129 697 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 NPPBP16860 134 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 CD38P28907 300 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 ALDH18A1P54886 795 aaKnown RBP6.66□□□□□ -1.34
PCF11-202ENST00000528336 KCNB1Q14721 858 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 GRM4Q14833 912 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 CERKLQ49MI3 558 aaPredicted RBP6.66□□□□□ -1.34
PCF11-202ENST00000528336 FAM90A2PQ658T7 463 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 DPY19L2P1Q6NXN4 242 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 LINC01465Q8N7H1 131 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 ATG16L2Q8NAA4 619 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 NTN5Q8WTR8 489 aaPredicted RBP6.66□□□□□ -1.34
PCF11-202ENST00000528336 DDB2Q92466 427 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 NUDT22Q9BRQ3 303 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 ADGRE3Q9BY15 652 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 LRFN1Q9P244 771 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 SCAF8Q9UPN6 1271 aaKnown RBP6.66□□□□□ -1.34
PCF11-202ENST00000528336 FGD5Q6ZNL6 1462 aa6.66□□□□□ -1.34
PCF11-202ENST00000528336 TOP2BQ02880 1626 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 BTBD19C9JJ37 291 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 MASP2O00187 686 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 NPC1O15118 1278 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 DNPH1O43598 174 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 SKAP2O75563 359 aaPredicted RBP6.65□□□□□ -1.34
PCF11-202ENST00000528336 GLP2RO95838 553 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 ANXA6P08133 673 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 CYP2D6P10635 497 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 KLRK1P26718 216 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 PDIA3P30101 505 aaKnown RBP6.65□□□□□ -1.34
PCF11-202ENST00000528336 AKT1P31749 480 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 RAE1P78406 368 aaKnown RBP6.65□□□□□ -1.34
PCF11-202ENST00000528336 ICA1Q05084 483 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 CSHL1Q14406 222 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 CC2D1BQ5T0F9 858 aaKnown RBP6.65□□□□□ -1.34
PCF11-202ENST00000528336 PTF1AQ7RTS3 328 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 KRT27Q7Z3Y8 459 aa6.65□□□□□ -1.34
PCF11-202ENST00000528336 CLASRPQ8N2M8 674 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms