RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 C10orf76Q5T2E6 689 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 ADGRF1Q5T601 910 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 EMC10Q5UCC4 262 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 NUGGCQ68CJ6 796 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 SLC47A2Q86VL8 602 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 RASSF3Q86WH2 238 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 SFTPA1Q8IWL2 248 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 CCDC33Q8N5R6 958 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 ALLCQ8N6M5 410 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 TSTD1Q8NFU3 115 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 GAB3Q8WWW8 586 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 SERPINB11Q96P15 392 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 HHIPQ96QV1 700 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 LSM14BQ9BX40 385 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 NAT10Q9H0A0 1025 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 POLR3BQ9NW08 1133 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 ASNSD1Q9NWL6 643 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 NCDNQ9UBB6 729 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 LIMA1Q9UHB6 759 aaKnown RBP12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 CYTH4Q9UIA0 394 aa12.63□□□□□ -0.39
TRAPPC4-209ENST00000528230 E5RJQ4 531 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 SGK1O00141 431 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 GFRA2O00451 464 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 TRIM24O15164 1050 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 RPP40O75818 363 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 ALDH1A2O94788 518 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 KLF8O95600 359 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 HOXC13P31276 330 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 TBX4P57082 545 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 TYRO3Q06418 890 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 RAPGEF1Q13905 1077 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 E2F5Q15329 346 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 EFHC1Q5JVL4 640 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 FKBP15Q5T1M5 1219 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZNF513Q8N8E2 541 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 TXNDC5Q8NBS9 432 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 DQX1Q8TE96 717 aaKnown RBP12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 DDI1Q8WTU0 396 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 FAM149B1Q96BN6 582 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 LOXL4Q96JB6 756 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 PPP1R13BQ96KQ4 1090 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 POPDC2Q9HBU9 364 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 POLMQ9NP87 494 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 PLK2Q9NYY3 685 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 GMEB2Q9UKD1 530 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 NAALADL1Q9UQQ1 740 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 TLR6Q9Y2C9 796 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 CEP83Q9Y592 693 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 FHOD1Q9Y613 1164 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 OTOGLQ3ZCN5 2332 aa12.62□□□□□ -0.39
TRAPPC4-209ENST00000528230 ANTXRLA6NF34 631 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 PRRT4C9JH25 899 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CAPN9O14815 690 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 NPC1O15118 1278 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 IRAK2O43187 625 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 MSI1O43347 362 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 LRP3O75074 770 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 ADAM23O75077 832 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 RETP07949 1114 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 HNRNPLP14866 589 aaKnown RBP eCLIP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CYP11B1P15538 503 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZNF18P17022 549 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 NTSR1P30989 418 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CDH5P33151 784 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 SLC11A2P49281 568 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 SRSF5Q13243 272 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 NCAPHQ15003 741 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 MPP7Q5T2T1 576 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 SYPL2Q5VXT5 272 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 PRR23BQ6ZRT6 265 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 TOGARAM2Q6ZUX3 1019 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CEP68Q76N32 757 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CACNA2D4Q7Z3S7 1137 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZDHHC17Q8IUH5 632 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 TMA16Q96EY4 203 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 P2RY11Q96G91 374 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 SLC39A13Q96H72 371 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 PIWIL1Q96J94 861 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 ZC3H10Q96K80 434 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 CPXM1Q96SM3 734 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 DDX50Q9BQ39 737 aaKnown RBP12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 BPIFA3Q9BQP9 254 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 GANQ9H2C0 597 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 HCN2Q9UL51 889 aa12.61□□□□□ -0.39
TRAPPC4-209ENST00000528230 F8VZ95 297 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 TIMM44O43615 452 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 ACSL4O60488 711 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 IGLV3-25P01717 112 aa12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 PNMA6AP0CW24 399 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 EIF4EBP2Q13542 120 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC4-209ENST00000528230 EIF4HQ15056 248 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms