RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 FYB2Q5VWT5 728 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 CHPFQ8IZ52 775 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 SCML4Q8N228 414 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 P2RY11Q96G91 374 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 SIX2Q9NPC8 291 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 EBF1Q9UH73 591 aa16.21■□□□□ 0.19
CAPN1-213ENST00000527897 CAPN9O14815 690 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 ADAM23O75077 832 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 HOXB2P14652 356 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 NTSR1P30989 418 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 TBX4P57082 545 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 PTK2Q05397 1052 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 TCP11X2Q5H9J9 407 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 SDE2Q6IQ49 451 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 MSANTD2Q6P1R3 559 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 GPR161Q8N6U8 529 aaKnown RBP16.2■□□□□ 0.18
CAPN1-213ENST00000527897 ADAM32Q8TC27 787 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 RLN3Q8WXF3 142 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 SHC3Q92529 594 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 ACOX2Q99424 681 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 LSM14BQ9BX40 385 aaKnown RBP16.2■□□□□ 0.18
CAPN1-213ENST00000527897 ARRDC1-AS1Q9H2J1 176 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 CYTH4Q9UIA0 394 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 NAALADL1Q9UQQ1 740 aa16.2■□□□□ 0.18
CAPN1-213ENST00000527897 FAM170AA1A519 330 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 FOXN3O00409 490 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 SART1O43290 800 aaKnown RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 PENKP01210 267 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 CISD3P0C7P0 127 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 CHRM1P11229 460 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 KRT9P35527 623 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 PDCLQ13371 301 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 ELF2Q15723 593 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 CT47A1Q5JQC4 288 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 RASSF3Q86WH2 238 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 CPXM2Q8N436 756 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 RMDN1Q96DB5 314 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 VPS16Q9H269 839 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 SEMA4GQ9NTN9 838 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 CACNA2D2Q9NY47 1150 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 TJP2Q9UDY2 1190 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 HCN2Q9UL51 889 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 FHOD1Q9Y613 1164 aa16.19■□□□□ 0.18
CAPN1-213ENST00000527897 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.19■□□□□ 0.18
CAPN1-213ENST00000527897 DCHS1Q96JQ0 3298 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 PAPSS1O43252 624 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 MOCS2O96007 188 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 TPM2P07951 284 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 EEF1GP26641 437 aaKnown RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 SLC11A2P49281 568 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 GEN1Q17RS7 908 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 RSPO4Q2I0M5 234 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 PLK5Q496M5 336 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 MPPE1Q53F39 396 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 RFWD3Q6PCD5 774 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 SLC47A2Q86VL8 602 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 UNC45BQ8IWX7 931 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 C1orf131Q8NDD1 294 aaKnown RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 ENOX1Q8TC92 643 aaKnown RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 KCNV2Q8TDN2 545 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 DQX1Q8TE96 717 aaKnown RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 STK32AQ8WU08 396 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 TMA16Q96EY4 203 aaKnown RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 SLC4A5Q9BY07 1137 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 CIPCQ9C0C6 399 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 DUSP15Q9H1R2 295 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-213ENST00000527897 PLCB1Q9NQ66 1216 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 CLEC4EQ9ULY5 219 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 RAD54BQ9Y620 910 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 THADAQ6YHU6 1953 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 ABCA7Q8IZY2 2146 aa16.18■□□□□ 0.18
CAPN1-213ENST00000527897 SYNJ2BP-COX16A0A087WUM0 186 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 GOLGA6L7A0A1B0GV03 622 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 WASH3PC4AMC7 463 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 ZBTB24O43167 697 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-213ENST00000527897 MAP3K13O43283 966 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 RHOBTB1O94844 696 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 MBD3O95983 291 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 FYNP06241 537 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 BCKDHBP21953 392 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 TGM1P22735 817 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 CLCN1P35523 988 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 LMNB2Q03252 620 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 ARID5AQ03989 594 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 DRAP1Q14919 205 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-213ENST00000527897 STX1AQ16623 288 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 MEA1Q16626 185 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 CCDC183Q5T5S1 534 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 ADGRF1Q5T601 910 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 KLHDC7AQ5VTJ3 777 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 SYPL2Q5VXT5 272 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 NUGGCQ68CJ6 796 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 RBM43Q6ZSC3 357 aaKnown RBP16.17■□□□□ 0.18
CAPN1-213ENST00000527897 ANKS1BQ7Z6G8 1248 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 FAM217AQ8IXS0 508 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 PPP1R13BQ96KQ4 1090 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 SPACA7Q96KW9 195 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms