RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SLC2A13Q96QE2 648 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 PCDHB18PQ96TA0 734 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 AGPAT1Q99943 283 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 ARHGEF4Q9NR80 690 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 IFNKQ9P0W0 207 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 DEC1Q9P2X7 70 aa16.9■□□□□ 0.3
SSSCA1-202ENST00000526433 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 K7EQS6 105 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 RNF40O75150 1001 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 TULP3O75386 442 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 TRUB2O95900 331 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 APODP05090 189 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 SP9P0CG40 484 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 PBX1P40424 430 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 CXCL12P48061 93 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 PITX1P78337 314 aaPredicted RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 CDK17Q00537 523 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 CSTF1Q05048 431 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 MESP2Q0VG99 397 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 C2CD6Q53TS8 623 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 ADGRF1Q5T601 910 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 SLC26A9Q7LBE3 791 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 XYLT1Q86Y38 959 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 FAM217AQ8IXS0 508 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 ZNF397Q8NF99 534 aaPredicted RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 BHMTQ93088 406 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 AZIN2Q96A70 460 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 P2RY11Q96G91 374 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 SLC39A13Q96H72 371 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 FCRL2Q96LA5 508 aaPredicted RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 XPO6Q96QU8 1125 aaKnown RBP16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 PLK2Q9NYY3 685 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 FBXO4Q9UKT5 387 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 TLR6Q9Y2C9 796 aa16.89■□□□□ 0.29
SSSCA1-202ENST00000526433 LRRC53A6NM62 1247 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 TRIM24O15164 1050 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 KAT7O95251 611 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 LATS1O95835 1130 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 UNGP13051 313 aaPredicted RBP16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 GRIA2P42262 883 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 CCR3P51677 355 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 RNASE9P60153 205 aaKnown RBP16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 SATB1Q01826 763 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 NHLH1Q02575 133 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 KDSRQ06136 332 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 NNTQ13423 1086 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 PKN3Q6P5Z2 889 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 SFTPA1Q8IWL2 248 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 RNF214Q8ND24 703 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 SLC30A5Q8TAD4 765 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 NUP58Q9BVL2 599 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 TTYH3Q9C0H2 523 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 DNAJC17Q9NVM6 304 aaKnown RBP16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 C2orf42Q9NWW7 574 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 STOML2Q9UJZ1 356 aa16.88■□□□□ 0.29
SSSCA1-202ENST00000526433 GOLGA6L7A0A1B0GV03 622 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 TBC1D3BA6NDS4 549 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 ANTXRLA6NF34 631 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 CACNG3O60359 315 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 ACSL4O60488 711 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 TSPAN3O60637 253 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 ATG13O75143 517 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 DAB1O75553 588 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 PENKP01210 267 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 IGLV3-25P01717 112 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 CYBBP04839 570 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 TNFAIP3P21580 790 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 MMP8P22894 467 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 GBP1P32455 592 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 NOS2P35228 1153 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 SCNN1AP37088 669 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 TNFRSF4P43489 277 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 SLC11A2P49281 568 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 ZNF445P59923 1031 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 EIF4EBP2Q13542 120 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 ASIC2Q16515 512 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 CLEC16AQ2KHT3 1053 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 PREPLQ4J6C6 727 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 MPPE1Q53F39 396 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 ZC3H12AQ5D1E8 599 aaKnown RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 FIGNQ5HY92 759 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 SFMBT2Q5VUG0 894 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 FYB2Q5VWT5 728 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 GRAMD4Q6IC98 578 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 TSSK4Q6SA08 328 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 CCDC26Q8TAB7 109 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 DDI1Q8WTU0 396 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 TMA16Q96EY4 203 aaKnown RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 XPO4Q9C0E2 1151 aaKnown RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 FAM204AQ9H8W3 233 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 PRMT8Q9NR22 394 aaPredicted RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 SEPT11Q9NVA2 429 aaKnown RBP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 FAM86C1Q9NVL1 165 aa16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.87■□□□□ 0.29
SSSCA1-202ENST00000526433 AIPL1Q9NZN9 384 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms