RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 MDM1Q8TC05 714 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 ZNF396Q96N95 335 aaPredicted RBP15□□□□□ -0.01
CPSF1-201ENST00000526271 ORAI3Q9BRQ5 295 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 PNPLA8Q9NP80 782 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 DNMT3LQ9UJW3 386 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 PCOLCE2Q9UKZ9 415 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 BTBD3Q9Y2F9 522 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 PCDHA5Q9Y5H7 936 aa15□□□□□ -0.01
CPSF1-201ENST00000526271 HELZ2Q9BYK8 2649 aaKnown RBP15□□□□□ -0.01
CPSF1-201ENST00000526271 KNTC1P50748 2209 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 H0Y626 953 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 PDXKO00764 312 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 TRIM16O95361 564 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 SYPP08247 313 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 SLFN14P0C7P3 912 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 NCAM1P13591 858 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 HLA-EP13747 358 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 CD58P19256 250 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 PIK3CAP42336 1068 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 GCLMP48507 274 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 SLC14A1Q13336 389 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 ZNF234Q14588 700 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 SOWAHCQ53LP3 525 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-201ENST00000526271 RAB41Q5JT25 222 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 KCNT1Q5JUK3 1230 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 DCAF12L1Q5VU92 463 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 GLRX5Q86SX6 157 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 TMPRSS6Q8IU80 811 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 TAF4BQ92750 862 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 BBC3Q96PG8 261 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-201ENST00000526271 ARID3AQ99856 593 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 DUSP16Q9BY84 665 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 PRDM16Q9HAZ2 1276 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 NAGPAQ9UK23 515 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 LSM7Q9UK45 103 aaKnown RBP14.99□□□□□ -0.01
CPSF1-201ENST00000526271 RCOR1Q9UKL0 485 aa14.99□□□□□ -0.01
CPSF1-201ENST00000526271 SETXQ7Z333 2677 aaKnown RBP14.99□□□□□ -0.01
CPSF1-201ENST00000526271 METTL12A8MUP2 240 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 IKBKBO14920 756 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 GABBR2O75899 941 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 F13A1P00488 732 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 CORO1AP31146 461 aaKnown RBP14.98□□□□□ -0.01
CPSF1-201ENST00000526271 SGSHP51688 502 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 DNM1Q05193 864 aaKnown RBP14.98□□□□□ -0.01
CPSF1-201ENST00000526271 EFEMP1Q12805 493 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 PREPLQ4J6C6 727 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-201ENST00000526271 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 CEP135Q66GS9 1140 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 LAYNQ6UX15 382 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 RABEPKQ7Z6M1 372 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 SLC4A11Q8NBS3 891 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 GOLGA5Q8TBA6 731 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 WFDC5Q8TCV5 224 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 NT5C1AQ9BXI3 368 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 FAM124BQ9H5Z6 455 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-201ENST00000526271 C6orf106Q9H6K1 298 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-201ENST00000526271 CLIC5Q9NZA1 410 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 RASAL2Q9UJF2 1139 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 TRAF3IP3Q9Y228 551 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 HPSEQ9Y251 543 aa14.98□□□□□ -0.01
CPSF1-201ENST00000526271 ARID1BQ8NFD5 2236 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-201ENST00000526271 NYNRINQ9P2P1 1898 aaKnown RBP14.97□□□□□ -0.01
CPSF1-201ENST00000526271 A0A1B0GTW7 788 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 NDUFS2O75306 463 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 ATXN1LP0C7T5 689 aaKnown RBP14.97□□□□□ -0.01
CPSF1-201ENST00000526271 ZSCAN22P10073 491 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-201ENST00000526271 HOXD9P28356 352 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-201ENST00000526271 VAMP7P51809 220 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 RAD23BP54727 409 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 PTPRNQ16849 979 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 HLA-BQ31612 363 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 ZCWPW2Q504Y3 356 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 SDE2Q6IQ49 451 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 PIGZQ86VD9 579 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 DENND1CQ8IV53 801 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 ZNF366Q8N895 744 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 NIF3L1Q9GZT8 377 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 CYP3A43Q9HB55 503 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 ELOVL2Q9NXB9 296 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 EIF2B4Q9UI10 523 aaKnown RBP14.97□□□□□ -0.01
CPSF1-201ENST00000526271 NFE2L3Q9Y4A8 694 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 DOCK9Q9BZ29 2069 aa14.97□□□□□ -0.01
CPSF1-201ENST00000526271 A0A1B0GVL5 298 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 A0A1B0GVT2 93 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 C10orf142B7Z368 130 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 CLSTN1O94985 981 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 PDIA4P13667 645 aaKnown RBP14.96□□□□□ -0.01
CPSF1-201ENST00000526271 PFKFB1P16118 471 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 HLA-FP30511 346 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 ACSL1P33121 698 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 ME1P48163 572 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 CAMK2BQ13554 666 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 NFIL3Q16649 462 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 COL28A1Q2UY09 1125 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 NUDT18Q6ZVK8 323 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 CPXM2Q8N436 756 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 CADM4Q8NFZ8 388 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 FOXJ1Q92949 421 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 TATDN2Q93075 761 aa14.96□□□□□ -0.01
CPSF1-201ENST00000526271 CRELD1Q96HD1 420 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms