RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SAMSN1Q9NSI8 373 aaKnown RBP19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 ANO10Q9NW15 660 aa19.24■□□□□ 0.67
TSPAN4-216ENST00000526055 GFRA2O00451 464 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 HNRNPLP14866 589 aaKnown RBP eCLIP19.23■□□□□ 0.675e-7■□□□□ 11.2
TSPAN4-216ENST00000526055 SDHBP21912 280 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 NTSR1P30989 418 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 SNX16P57768 344 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 LMNB2Q03252 620 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 LPAL2Q16609 132 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 MPPE1Q53F39 396 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 ADGRF1Q5T601 910 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 SDE2Q6IQ49 451 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 SASS6Q6UVJ0 657 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 TMEM92Q6UXU6 159 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 SCUBE3Q8IX30 993 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 SERPINB11Q96P15 392 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 MIS12Q9H081 205 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 PCDHGA5Q9Y5G8 931 aa19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 MYO18AQ92614 2054 aaKnown RBP19.23■□□□□ 0.67
TSPAN4-216ENST00000526055 PRR5-ARHGAP8B1AHC4 643 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 PIK3R2O00459 728 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 TRIM24O15164 1050 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 ADAM23O75077 832 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 RHOBTB1O94844 696 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 TPM2P07951 284 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 NCAM1P13591 858 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 TGM1P22735 817 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 ARHGAP8P85298 464 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 APBA1Q02410 837 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 PDCLQ13371 301 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 BYSLQ13895 437 aaKnown RBP19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 ELF2Q15723 593 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 ANO7Q6IWH7 933 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 DPY19L2P1Q6NXN4 242 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 FAM71AQ8IYT1 594 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 MDGA1Q8NFP4 955 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 CLEC4CQ8WTT0 213 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 FAM149B1Q96BN6 582 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 NOX5Q96PH1 765 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 PLK2Q9NYY3 685 aa19.22■□□□□ 0.67
TSPAN4-216ENST00000526055 SPAG17Q6Q759 2223 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 ANTXRLA6NF34 631 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 PRRT4C9JH25 899 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 FOXN3O00409 490 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 PES1O00541 588 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 IRAK2O43187 625 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 EPN2O95208 641 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 GLI1P08151 1106 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 ID4P47928 161 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 SLC11A2P49281 568 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 TBX4P57082 545 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 EIF4HQ15056 248 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 CSRP2Q16527 193 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 PLK5Q496M5 336 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 HSP90AA4PQ58FG1 418 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 MPP7Q5T2T1 576 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 CCDC183Q5T5S1 534 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 KLHDC7AQ5VTJ3 777 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 CDKAL1Q5VV42 579 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 TOGARAM2Q6ZUX3 1019 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 KBTBD6Q86V97 674 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 ZNF557Q8N988 423 aaPredicted RBP19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 OLIG1Q8TAK6 271 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 DDI1Q8WTU0 396 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 UCMAQ8WVF2 138 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 BHMTQ93088 406 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 PIWIL1Q96J94 861 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 GABRG3Q99928 467 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 DDX50Q9BQ39 737 aaKnown RBP19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 POPDC2Q9HBU9 364 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 ACP6Q9NPH0 428 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 ASNSD1Q9NWL6 643 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 CYTH4Q9UIA0 394 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 TLR6Q9Y2C9 796 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 DAAM1Q9Y4D1 1078 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 CEP83Q9Y592 693 aa19.21■□□□□ 0.67
TSPAN4-216ENST00000526055 E5RJQ4 531 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 ZBTB24O43167 697 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 PAPSS1O43252 624 aaPredicted RBP19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 MSI1O43347 362 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 TIMM44O43615 452 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 FYNP06241 537 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 HOXB2P14652 356 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 KRT9P35527 623 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 KCNMA1Q12791 1236 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 STX1AQ16623 288 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 EGFLAMQ63HQ2 1017 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 ANKS1BQ7Z6G8 1248 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 CHPFQ8IZ52 775 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 DQX1Q8TE96 717 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 TMA16Q96EY4 203 aaKnown RBP19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 P2RY11Q96G91 374 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 PLCB1Q9NQ66 1216 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 HCN2Q9UL51 889 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 USP18Q9UMW8 372 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 CACNA1AO00555 2505 aa19.2■□□□□ 0.66
TSPAN4-216ENST00000526055 CEP250Q9BV73 2442 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 TCRBV21S2A2A0A5A6 115 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 CAPN9O14815 690 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 UCHL3P15374 230 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms