RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 PAPPA2Q9BXP8 1791 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 TMEM191CA6NGB0 347 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 NT5C1B-RDH14C9J2C7 533 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 KLRF2D3W0D1 207 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 CPLX1O14810 134 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 PFKFB2O60825 505 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 ERN1O75460 977 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 OFD1O75665 1012 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 RFPL1O75677 317 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 CDKL5O76039 1030 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 NDUFB10O96000 172 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 FOSP01100 380 aaPredicted RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 PARP1P09874 1014 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 PDHBP11177 359 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 RXRAP19793 462 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 SLC1A4P43007 532 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 METAP2P50579 478 aaKnown RBP eCLIP5.06□□□□□ -1.6
USP48-211ENST00000526044 MAP2K6P52564 334 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 TAP1Q03518 808 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 DPTQ07507 201 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 TROAPQ12815 778 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 FOXD4Q12950 439 aaPredicted RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 PPIL2Q13356 520 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 GRM4Q14833 912 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 DEFB115Q30KQ5 88 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 FLYWCH1Q4VC44 716 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 CPLX2Q6PUV4 134 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 APOA5Q6Q788 366 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 ZNF365Q70YC5 407 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 FASTKD5Q7L8L6 764 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 HEATR3Q7Z4Q2 680 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 MICU3Q86XE3 530 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 RAB11FIP4Q86YS3 637 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 CHURC1Q8WUH1 139 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 LPAR1Q92633 364 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 C1GALT1C1Q96EU7 318 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 FAM167AQ96KS9 214 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 ADAM2Q99965 735 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 LZTS2Q9BRK4 669 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 ALOXE3Q9BYJ1 711 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 WDR11Q9BZH6 1224 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 UBA5Q9GZZ9 404 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 SERHL2Q9H4I8 314 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 WDCPQ9H6R7 721 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 WDR26Q9H7D7 661 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 VCPKMTQ9H867 229 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 GALNT9Q9HCQ5 603 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 TMEM74BQ9NUR3 256 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 RBM28Q9NW13 759 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 HOXC10Q9NYD6 342 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 ANKFY1Q9P2R3 1169 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 USP25Q9UHP3 1055 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 KCNE5Q9UJ90 142 aa5.06□□□□□ -1.6
USP48-211ENST00000526044 ISY1Q9ULR0 285 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 MTO1Q9Y2Z2 717 aaKnown RBP5.06□□□□□ -1.6
USP48-211ENST00000526044 CCDC78A2IDD5 438 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 UNC119BA6NIH7 251 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 TMEM232C9JQI7 657 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 WDR46O15213 610 aaKnown RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 AP1G1O43747 822 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 SH3BP5O60239 455 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 EIF3JO75822 258 aaKnown RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 SPDEFO95238 335 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 HSP90AA1P07900 732 aaKnown RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 GOLGA8HP0CJ92 632 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 SNHG28P0DPA3 235 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CETPP11597 493 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 FCER1AP12319 257 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 HSPA6P17066 643 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 RCAN1P53805 252 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 HMGCS2P54868 508 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 TBX4P57082 545 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CXADRP78310 365 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 AKAP17AQ02040 695 aaKnown RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 ZNF543Q08ER8 600 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 IKQ13123 557 aaPredicted RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 GTF2H3Q13889 308 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 COG2Q14746 738 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CCDC96Q2M329 555 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 ASPRV1Q53RT3 343 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CCDC157Q569K6 752 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 KIAA1755Q5JYT7 1200 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 FAM83BQ5T0W9 1011 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 GPATCH4Q5T3I0 446 aaKnown RBP5.05□□□□□ -1.6
USP48-211ENST00000526044 LAIR1Q6GTX8 287 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CATSPERGQ6ZRH7 1159 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 PDSS2Q86YH6 399 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CCDC83Q8IWF9 413 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 TPH2Q8IWU9 490 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 GRAMD1CQ8IYS0 662 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 SPICE1Q8N0Z3 855 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 GPATCH11Q8N954 259 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 RNF31Q96EP0 1072 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 C12orf42Q96LP6 360 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 AIFM3Q96NN9 605 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 BRD9Q9H8M2 597 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CYP4F11Q9HBI6 524 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 VAT1LQ9HCJ6 419 aa5.05□□□□□ -1.6
USP48-211ENST00000526044 CFAP97Q9P2B7 532 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms