RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 C6orf106Q9H6K1 298 aaPredicted RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.91□□□□□ -1.3
CD44-221ENST00000526000 ELOVL2Q9NXB9 296 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 THAP10Q9P2Z0 257 aaPredicted RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 SUSD2Q9UGT4 822 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 PCOLCE2Q9UKZ9 415 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 AGO1Q9UL18 857 aaKnown RBP6.91□□□□□ -1.3
CD44-221ENST00000526000 PCDHA7Q9UN72 937 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 GPSM3Q9Y4H4 160 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 SNX11Q9Y5W9 270 aa6.91□□□□□ -1.3
CD44-221ENST00000526000 FAM221BA6H8Z2 402 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 EIF4E1BA6NMX2 242 aaKnown RBP6.9□□□□□ -1.3
CD44-221ENST00000526000 GFRA2O00451 464 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 KLRC4O43908 158 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 CBFA2T3O75081 653 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 PPP6R2O75170 966 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 FSBPO95073 299 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 YEATS4O95619 227 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 NR3C1P04150 777 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 ACSL1P33121 698 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 ASPAP45381 313 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 NUMBP49757 651 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 VAMP7P51809 220 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 KIF11P52732 1056 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 EHHADHQ08426 723 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 SLC14A1Q13336 389 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 HNRNPDQ14103 355 aaKnown RBP6.9□□□□□ -1.3
CD44-221ENST00000526000 ZACNQ401N2 412 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 FNDC3BQ53EP0 1204 aaKnown RBP6.9□□□□□ -1.3
CD44-221ENST00000526000 KCNT1Q5JUK3 1230 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 C1orf220Q5T0J3 134 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 FYB2Q5VWT5 728 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 TMEM215Q68D42 235 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 RSRC2Q7L4I2 434 aaKnown RBP6.9□□□□□ -1.3
CD44-221ENST00000526000 UNC93AQ86WB7 457 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 KIAA0895Q8NCT3 520 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 TAS1R2Q8TE23 839 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 UCMAQ8WVF2 138 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 DNASE2BQ8WZ79 361 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 EDEM1Q92611 657 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 PAGE5Q96GU1 130 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 BBC3Q96PG8 261 aaPredicted RBP6.9□□□□□ -1.3
CD44-221ENST00000526000 NUP58Q9BVL2 599 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 NT5C1AQ9BXI3 368 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 SCAND2PQ9GZW5 306 aaPredicted RBP6.9□□□□□ -1.3
CD44-221ENST00000526000 CUEDC2Q9H467 287 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 VRTNQ9H8Y1 702 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 CSNK1G1Q9HCP0 422 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 CYLDQ9NQC7 956 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 EXOC1Q9NV70 894 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 DMAC2Q9NW81 257 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 MARK1Q9P0L2 795 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 MARCH2Q9P0N8 246 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 STIM2Q9P246 746 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 SFMBT1Q9UHJ3 866 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 FBXO10Q9UK96 956 aa6.9□□□□□ -1.3
CD44-221ENST00000526000 MYO16Q9Y6X6 1858 aa6.9□□□□□ -1.31
CD44-221ENST00000526000 PTPRDP23468 1912 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 GOLGA6L7A0A1B0GV03 622 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 A0A1B0GVL5 298 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 PVALEFA0A1B0GWK0 134 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 H0Y8X5 98 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 CBX4O00257 560 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 TULP2O00295 520 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 PIK3R2O00459 728 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 ASS1P00966 412 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 PENKP01210 267 aaPredicted RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 PRB1P04280 392 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 CYBBP04839 570 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 RPN1P04843 607 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 OXTRP30559 389 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 CHKAP35790 457 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 COPAP53621 1224 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 AP3M2P53677 418 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 SNRPFP62306 86 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 KRT85P78386 507 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 COG7P83436 770 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 PPP3CAQ08209 521 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 DHRS13Q6UX07 377 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 SERPINA13PQ6UXR4 307 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 CHST9Q7L1S5 443 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 GATAD2AQ86YP4 633 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 C12orf56Q8IXR9 622 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 CEP57L1Q8IYX8 460 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 UBA3Q8TBC4 463 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 TATDN2Q93075 761 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 TMA16Q96EY4 203 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 PIWIL1Q96J94 861 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 DUSP16Q9BY84 665 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 ULBP1Q9BZM6 244 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 LHX5Q9H2C1 402 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 KCTD10Q9H3F6 313 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 USP36Q9P275 1121 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 CGNQ9P2M7 1197 aaKnown RBP6.89□□□□□ -1.31
CD44-221ENST00000526000 FRMD4BQ9Y2L6 1034 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 AKAP13Q12802 2813 aa6.89□□□□□ -1.31
CD44-221ENST00000526000 PKD1L2Q7Z442 2459 aa6.88□□□□□ -1.31
CD44-221ENST00000526000 UBE4BO95155 1302 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms