RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 IFRD2Q12894 506 aaPredicted RBP12.78□□□□□ -0.36
CHKA-203ENST00000525155 NR1H3Q13133 447 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 TSR1Q2NL82 804 aaKnown RBP12.78□□□□□ -0.36
CHKA-203ENST00000525155 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 LY6G5CQ5SRR4 150 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 PPP1R2P3Q6NXS1 205 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 TRIM72Q6ZMU5 477 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 SLC47A2Q86VL8 602 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 TTC30AQ86WT1 665 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 GAS2L3Q86XJ1 694 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 ABCA7Q8IZY2 2146 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 KIAA1958Q8N8K9 716 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 SYN2Q92777 582 aaPredicted RBP12.78□□□□□ -0.36
CHKA-203ENST00000525155 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 LRRC4Q9HBW1 653 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 GMIPQ9P107 970 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 CAPN11Q9UMQ6 739 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 SCML2Q9UQR0 700 aa12.78□□□□□ -0.36
CHKA-203ENST00000525155 LUC7L2Q9Y383 392 aaKnown RBP12.78□□□□□ -0.36
CHKA-203ENST00000525155 BZW2Q9Y6E2 419 aaKnown RBP12.78□□□□□ -0.36
CHKA-203ENST00000525155 BCLAF3A2AJT9 711 aaKnown RBP12.77□□□□□ -0.37
CHKA-203ENST00000525155 SART1O43290 800 aaKnown RBP12.77□□□□□ -0.37
CHKA-203ENST00000525155 FBXO21O94952 628 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 MPLP40238 635 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 PSEN1P49768 467 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 KIF11P52732 1056 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 PDE4CQ08493 712 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 CRY1Q16526 586 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 RAB41Q5JT25 222 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 N4BP2L1Q5TBK1 243 aaPredicted RBP12.77□□□□□ -0.37
CHKA-203ENST00000525155 SFMBT2Q5VUG0 894 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 GPRIN1Q7Z2K8 1008 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 TADA2BQ86TJ2 420 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 PIGZQ86VD9 579 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 TMEM25Q86YD3 366 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 MIB1Q86YT6 1006 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 VSTM4Q8IW00 320 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 BBS7Q8IWZ6 715 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 ETFBKMTQ8IXQ9 262 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 SIX6OS1Q8N1H7 587 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 SCML4Q8N228 414 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 ALLCQ8N6M5 410 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 TMEM35BQ8NCS4 154 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 OLIG1Q8TAK6 271 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 SLC35F5Q8WV83 523 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 BAP1Q92560 729 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 MRFAP1L1Q96HT8 127 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 CDK5RAP1Q96SZ6 601 aaKnown RBP12.77□□□□□ -0.37
CHKA-203ENST00000525155 TRIM62Q9BVG3 475 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 TPSD1Q9BZJ3 242 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 TTYH3Q9C0H2 523 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 TLR8Q9NR97 1041 aaKnown RBP12.77□□□□□ -0.37
CHKA-203ENST00000525155 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 MMP17Q9ULZ9 603 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 GREB1Q4ZG55 1949 aa12.77□□□□□ -0.37
CHKA-203ENST00000525155 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 KAT7O95251 611 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 MBL2P11226 248 aaPredicted RBP12.76□□□□□ -0.37
CHKA-203ENST00000525155 TIE1P35590 1138 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 GPD2P43304 727 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 TUBP50607 506 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 DGKEP52429 567 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 CDR2Q01850 454 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 ASIC2Q16515 512 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 AASDHQ4L235 1098 aaPredicted RBP12.76□□□□□ -0.37
CHKA-203ENST00000525155 HECTD3Q5T447 861 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 CCDC186Q7Z3E2 898 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 NAT16Q8N8M0 369 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 TXNDC5Q8NBS9 432 aaKnown RBP12.76□□□□□ -0.37
CHKA-203ENST00000525155 UBA3Q8TBC4 463 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 EPS8L1Q8TE68 723 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 GOLGA1Q92805 767 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 PNKPQ96T60 521 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 ZSWIM1Q9BR11 485 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 KLF16Q9BXK1 252 aaPredicted RBP12.76□□□□□ -0.37
CHKA-203ENST00000525155 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 CNGB3Q9NQW8 809 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
CHKA-203ENST00000525155 MBD1Q9UIS9 605 aaPredicted RBP12.76□□□□□ -0.37
CHKA-203ENST00000525155 PCDHGA5Q9Y5G8 931 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 FRYQ5TBA9 3013 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 GON4LQ3T8J9 2241 aa12.76□□□□□ -0.37
CHKA-203ENST00000525155 E2F8A0AVK6 867 aa12.75□□□□□ -0.37
CHKA-203ENST00000525155 LRRC53A6NM62 1247 aa12.75□□□□□ -0.37
CHKA-203ENST00000525155 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
CHKA-203ENST00000525155 KLF8O95600 359 aaPredicted RBP12.75□□□□□ -0.37
CHKA-203ENST00000525155 ZBED1O96006 694 aa12.75□□□□□ -0.37
CHKA-203ENST00000525155 PNMA6AP0CW24 399 aaPredicted RBP12.75□□□□□ -0.37
CHKA-203ENST00000525155 MAP1BP46821 2468 aaKnown RBP12.75□□□□□ -0.37
CHKA-203ENST00000525155 RPL34P49207 117 aaKnown RBP12.75□□□□□ -0.37
CHKA-203ENST00000525155 TKTL1P51854 596 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms