RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 ADGRF1Q5T601 910 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ACBD5Q5T8D3 534 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 GRAMD4Q6IC98 578 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 DNAJC24Q6P3W2 148 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 RHBDF2Q6PJF5 856 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ZC3H14Q6PJT7 736 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 OLFML1Q6UWY5 402 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 Q6ZNB5 142 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MMS22LQ6ZRQ5 1243 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 TRMT11Q7Z4G4 463 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 TAC4Q86UU9 113 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHSY1Q86X52 802 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 XYLT1Q86Y38 959 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ADGRG2Q8IZP9 1017 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 DEFB106AQ8N104 65 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CPXM2Q8N436 756 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 WDTC1Q8N5D0 677 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC30A5Q8TAD4 765 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ADAM32Q8TC27 787 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 DDI1Q8WTU0 396 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CPLX3Q8WVH0 158 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 BAP1Q92560 729 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SYN2Q92777 582 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 BHMTQ93088 406 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ACDQ96AP0 544 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CLDN23Q96B33 292 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 BTN2A3PQ96KV6 586 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC2A13Q96QE2 648 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 C11orf70Q9BRQ4 267 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SELENOOQ9BVL4 669 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 IRX2Q9BZI1 471 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 LINC00597Q9H2U6 94 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHRDQ9H2X0 955 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 DEF6Q9H4E7 631 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 LMAN1LQ9HAT1 526 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ARHGEF4Q9NR80 690 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 METTL5Q9NRN9 209 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 AIPL1Q9NZN9 384 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 ADAM22Q9P0K1 906 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MARK1Q9P0L2 795 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 COX16Q9P0S2 106 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 AGO1Q9UL18 857 aaKnown RBP5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 CAPN11Q9UMQ6 739 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 MYO16Q9Y6X6 1858 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 DOCK8Q8NF50 2099 aa5.62□□□□□ -1.51
HMGB1P40-201ENST00000525121 FAM170AA1A519 330 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TBC1D3BA6NDS4 549 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 OTOL1A6NHN0 477 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMCO5BA8MYB1 307 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 F5H5T6 163 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CACNG3O60359 315 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 ACSL4O60488 711 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TULP3O75386 442 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 GABBR2O75899 941 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 KAT7O95251 611 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 EGFP01133 1207 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 IGLV3-27P01718 113 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 GYPCP04921 128 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 MYBL1P10243 752 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHRNB1P11230 501 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 KRT3P12035 628 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TYRP14679 529 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CHRNB2P17787 502 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SDC4P31431 198 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 RDXP35241 583 aaKnown RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 PBX1P40424 430 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 PRKCIP41743 596 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 GRIA2P42262 883 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 DGKGP49619 791 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 GALK1P51570 392 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 NRLP54845 237 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 DEUP1Q05D60 604 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CDH18Q13634 790 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CCINQ13939 588 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TAF5Q15542 800 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 ARL13BQ3SXY8 428 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SLC25A52Q3SY17 297 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 HSF5Q4G112 596 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 BRMS1LQ5PSV4 323 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 RABGAP1LQ5R372 815 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 C10orf76Q5T2E6 689 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 IER5LQ5T953 404 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TTC39BQ5VTQ0 682 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SYPL2Q5VXT5 272 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SDE2Q6IQ49 451 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 ACAD10Q6JQN1 1059 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 FSTL4Q6MZW2 842 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 DCUN1D2Q6PH85 259 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TXNDC11Q6PKC3 985 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SARM1Q6SZW1 724 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 ARCQ7LC44 396 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 IRF2BP2Q7Z5L9 587 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 TMEM25Q86YD3 366 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 PHF13Q86YI8 300 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 CNGA4Q8IV77 575 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 C1orf210Q8IVY1 113 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 VSTM4Q8IW00 320 aa5.61□□□□□ -1.51
HMGB1P40-201ENST00000525121 SPEM1Q8N4L4 309 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms