RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 RMI1Q9H9A7 625 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 WASH6PQ9NQA3 447 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 G6PC2Q9NQR9 355 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 NKX1-2Q9UD57 310 aaPredicted RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 RAB21Q9UL25 225 aa6.6□□□□□ -1.35
SKP1-213ENST00000524288 RRP7AQ9Y3A4 280 aaKnown RBP6.6□□□□□ -1.35
SKP1-213ENST00000524288 PIPSLA2A3N6 862 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 AP4M1O00189 453 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 CTIFO43310 598 aaKnown RBP6.59□□□□□ -1.35
SKP1-213ENST00000524288 SPRY2O43597 315 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 MBD4O95243 580 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 CD4P01730 458 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 HKR1P10072 659 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 XBP1P17861 261 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 MCM5P33992 734 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 UBE3AQ05086 875 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 DEUP1Q05D60 604 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 CLCA4Q14CN2 919 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 CYP1B1Q16678 543 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 AASDHQ4L235 1098 aaPredicted RBP6.59□□□□□ -1.35
SKP1-213ENST00000524288 RASGRP2Q7LDG7 609 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 LRRC71Q8N4P6 559 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 LINC00476Q8WZB0 136 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 TFAP2BQ92481 460 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 PRR11Q96HE9 360 aaPredicted RBP6.59□□□□□ -1.35
SKP1-213ENST00000524288 REXO5Q96IC2 774 aaKnown RBP6.59□□□□□ -1.35
SKP1-213ENST00000524288 TWNKQ96RR1 684 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 PRR25Q96S07 402 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 TWSG1Q9GZX9 223 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 RIOX1Q9H6W3 641 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 UBN1Q9NPG3 1134 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 NDUFAF4Q9P032 175 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 ZNHIT2Q9UHR6 403 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 VPS4AQ9UN37 437 aa6.59□□□□□ -1.35
SKP1-213ENST00000524288 SLC38A8A6NNN8 435 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 EFCAB8A8MWE9 144 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 YY2O15391 372 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 NR2F6P10588 404 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 CD19P15391 556 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 MPP1Q00013 466 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 E2F1Q01094 437 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 TRPC3Q13507 836 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 SMAD1Q15797 465 aaKnown RBP6.58□□□□□ -1.36
SKP1-213ENST00000524288 ZNF569Q5MCW4 686 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 FAM180BQ6P0A1 224 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 VWA1Q6PCB0 445 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 OLFML1Q6UWY5 402 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 RRP36Q96EU6 259 aaKnown RBP6.58□□□□□ -1.36
SKP1-213ENST00000524288 Q96MF0 132 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 TMX4Q9H1E5 349 aaPredicted RBP6.58□□□□□ -1.36
SKP1-213ENST00000524288 TERF2IPQ9NYB0 399 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 TRPC5Q9UL62 973 aaPredicted RBP6.58□□□□□ -1.36
SKP1-213ENST00000524288 DERAQ9Y315 318 aa6.58□□□□□ -1.36
SKP1-213ENST00000524288 FAM90A20PA6NIJ5 464 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 AGAP5A6NIR3 686 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 CES2O00748 559 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 HOXC11O43248 304 aaPredicted RBP6.57□□□□□ -1.36
SKP1-213ENST00000524288 PMPCBO75439 489 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 CPA1P15085 419 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 CREB1P16220 341 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 GKP32189 559 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 NXPH1P58417 271 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 SEMA3BQ13214 749 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 STRIP1Q5VSL9 837 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 FAM90A2PQ658T7 463 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 C16orf89Q6UX73 402 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 LNX2Q8N448 690 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 SLC9A6Q92581 669 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 HVCN1Q96D96 273 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 AIFM2Q9BRQ8 373 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 SAP30LQ9HAJ7 183 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 LIN7CQ9NUP9 197 aaKnown RBP6.57□□□□□ -1.36
SKP1-213ENST00000524288 FBXO28Q9NVF7 368 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 KCTD5Q9NXV2 234 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 RCE1Q9Y256 329 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 DNAJC16Q9Y2G8 782 aa6.57□□□□□ -1.36
SKP1-213ENST00000524288 LOC105369274A0A096LPK9 316 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 LOC102723532A0A0G2JNH3 316 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 HMGB1P1B2RPK0 211 aaPredicted RBP6.56□□□□□ -1.36
SKP1-213ENST00000524288 KIAA0355O15063 1070 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 HEXIM1O94992 359 aaKnown RBP6.56□□□□□ -1.36
SKP1-213ENST00000524288 LARGE1O95461 756 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 HNRNPA1P09651 372 aaKnown RBP eCLIP6.56□□□□□ -1.36
SKP1-213ENST00000524288 CTGFP29279 349 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 DDIT3P35638 169 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 TPTEP56180 551 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 MAPK7Q13164 816 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 ST3GAL2Q16842 350 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 TXNRD1Q16881 649 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 ERCC6LQ2NKX8 1250 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 ZNF484Q5JVG2 852 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 ZNF618Q5T7W0 954 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 DGAT2L7PQ6IED9 249 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 CLEC4GQ6UXB4 293 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 OR4N4Q8N0Y3 316 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 SLC44A3Q8N4M1 653 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 LINS1Q8NG48 757 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 NPIPB3Q92617 1050 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 STAMQ92783 540 aa6.56□□□□□ -1.36
SKP1-213ENST00000524288 CAVIN3Q969G5 261 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms