RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 IFNB1P01574 187 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FGF3P11487 239 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 BMP1P13497 986 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 SREBF1P36956 1147 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF132P52740 706 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TMBIM6P55061 237 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ARHGAP8P85298 464 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FXNQ16595 210 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ANKMY2Q8IV38 441 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 IQCF2Q8IXL9 164 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FAM111AQ96PZ2 611 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 GPATCH1Q9BRR8 931 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FHDC1Q9C0D6 1143 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 CCDC68Q9H2F9 335 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 IFT122Q9HBG6 1241 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 PNPLA3Q9NST1 481 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ERVK-11Q9UQG0 969 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TMA7Q9Y2S6 64 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 NOX1Q9Y5S8 564 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 RALGAPA2Q2PPJ7 1873 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 C7orf72A4D263 438 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF487B1APH4 448 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 H3BMQ9 156 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TADA2AO75478 443 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 SEC14L2O76054 403 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 CYP2D6P10635 497 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 BMP2P12643 396 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 CYP11B1P15538 503 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 NDST2P52849 883 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 MYL7Q01449 175 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 NSUN2Q08J23 767 aaKnown RBP eCLIP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF252P-AS1Q0IIN9 211 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TUBA3CQ13748 450 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 INSCQ1MX18 579 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 KRT80Q6KB66 452 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 RINT1Q6NUQ1 792 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 CDHR3Q6ZTQ4 885 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 CRLF3Q8IUI8 442 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 PPIL6Q8IXY8 311 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 MARVELD3Q96A59 401 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 OTUD5Q96G74 571 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 COG8Q96MW5 612 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 P2RX7Q99572 595 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TUT1Q9H6E5 874 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 UBE2TQ9NPD8 197 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ARMC1Q9NVT9 282 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 THAP1Q9NVV9 213 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ANKMY1Q9P2S6 941 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FRMD4BQ9Y2L6 1034 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 COL11A1P12107 1806 aaPredicted RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 hCG_1818297A0A087WSY0 165 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FAM159BA6NKW6 160 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 DNAJB5O75953 348 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ESRRBO95718 433 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 HOXD10P28358 340 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 MAPK4P31152 587 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 TRAP1Q12931 704 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 SPATS1Q496A3 300 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 AMIGO2Q86SJ2 522 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ANKRD13AQ8IZ07 590 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 RCOR2Q8IZ40 523 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 RDH13Q8NBN7 331 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 OR13F1Q8NGS4 319 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 PNPT1Q8TCS8 783 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 USP6NLQ92738 828 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 RPGRQ92834 1020 aaKnown RBP8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ANKRD36BP1Q96IX9 119 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 ARMC7Q9H6L4 198 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 FBXO8Q9NRD0 319 aa8.64□□□□□ -1.03
CSMD1-213ENST00000523488 EMSYQ7Z589 1322 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 MYOCOSA0A1B0GUC4 107 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 POTEB3A0JP26 581 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GOLGA8SH3BPF8 625 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 GOLGA8MH3BSY2 632 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 TRIM24O15164 1050 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CNOT3O75175 753 aaKnown RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ENTPD3O75355 529 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CAPN15O75808 1086 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SGPL1O95470 568 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 RFC1P35251 1148 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ACADSBP45954 432 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 MRPL19P49406 292 aaKnown RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CYP2J2P51589 502 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ARSEP51690 589 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 STAT2P52630 851 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 FNBP1LQ5T0N5 605 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 ATG16L1Q676U5 607 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 POTEBQ6S5H4 581 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 EPGNQ6UW88 154 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 TXNDC15Q96J42 360 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 MFSD14AQ96MC6 490 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 FERMT1Q9BQL6 677 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 SHCBP1LQ9BZQ2 653 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CAAP1Q9H8G2 361 aa8.63□□□□□ -1.03
CSMD1-213ENST00000523488 CRNNQ9UBG3 495 aaPredicted RBP8.63□□□□□ -1.03
CSMD1-213ENST00000523488 VWA7Q9Y334 891 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms