RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PPP2R5CQ13362 524 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 DMC1Q14565 340 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 MXD4Q14582 209 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 KARSQ15046 597 aaKnown RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 ITPRIPL2Q3MIP1 535 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TRIM61Q5EBN2 209 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TTC22Q5TAA0 569 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 EEF1DP3Q658K8 133 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TRIM68Q6AZZ1 485 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 IQCEQ6IPM2 695 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 SYT13Q7L8C5 426 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 NOSTRINQ8IVI9 506 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 IGDCC3Q8IVU1 814 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 C4orf19Q8IY42 314 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 ZNF655Q8N720 491 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 FRMD1Q8N878 549 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 PNPLA1Q8N8W4 532 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 OR2I1PQ8NGU4 316 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 RPLP0P6Q8NHW5 317 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TCTN2Q96GX1 697 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 EAF1Q96JC9 268 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 PWWP2AQ96N64 755 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 CAMK1GQ96NX5 476 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 LXNQ9BS40 222 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 GPR88Q9GZN0 384 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 FZD8Q9H461 694 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 SLC32A1Q9H598 525 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 SLITRK6Q9H5Y7 841 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 OBP2AQ9NY56 170 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 RGL1Q9NZL6 768 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 AFF4Q9UHB7 1163 aaKnown RBP7.24□□□□□ -1.25
SDCBP-210ENST00000522843 TCFL5Q9UL49 500 aa7.24□□□□□ -1.25
SDCBP-210ENST00000522843 PRPF3O43395 683 aaKnown RBP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 EPB41L2O43491 1005 aaKnown RBP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 HNRNPLP14866 589 aaKnown RBP eCLIP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 GNA11P29992 359 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 MCM4P33991 863 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 PTGER3P43115 390 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 DHPSP49366 369 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 DGKEP52429 567 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 NCBP1Q09161 790 aaKnown RBP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 GRSF1Q12849 480 aaKnown RBP eCLIP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 TFDP1Q14186 410 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 CTTNQ14247 550 aaKnown RBP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 NECTIN1Q15223 517 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 NPY5RQ15761 445 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 XKR9Q5GH70 373 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 CDCP2Q5VXM1 449 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 CREB3L3Q68CJ9 461 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 TPGS2Q68CL5 300 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 RASSF3Q86WH2 238 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 MARCH9Q86YJ5 346 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 EXOC8Q8IYI6 725 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 LEMD2Q8NC56 503 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 OLIG1Q8TAK6 271 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 BPIFB1Q8TDL5 484 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 ADAMTS14Q8WXS8 1223 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 NKD1Q969G9 470 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 DYDC2Q96IM9 177 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 FNBP1Q96RU3 617 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 GPRC5CQ9NQ84 441 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 GKN1Q9NS71 199 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 IGSF5Q9NSI5 407 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 VPS54Q9P1Q0 977 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 KLHL14Q9P2G3 628 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 RAI2Q9Y5P3 530 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 PTPRQQ9UMZ3 2332 aa7.23□□□□□ -1.25
SDCBP-210ENST00000522843 ATXN2Q99700 1313 aaKnown RBP7.23□□□□□ -1.25
SDCBP-210ENST00000522843 A0A087WWV3 80 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 KLF18A0A0U1RQI7 1052 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 SMIM28A0A1B0GU29 152 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 OR4Q2P0C623 313 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 ARSAP15289 507 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 TCF3P15923 654 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 MCM2P49736 904 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 CYP4F8P98187 520 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 LMAN2Q12907 356 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 RUNX3Q13761 415 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 NTRK3Q16288 839 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 FAM187BQ17R55 369 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 CTXN3Q4LDR2 81 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 GPR158Q5T848 1215 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 CDCA2Q69YH5 1023 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-210ENST00000522843 SYNE3Q6ZMZ3 975 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 HAUS6Q7Z4H7 955 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 SLITRK4Q8IW52 837 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 ELMOD1Q8N336 334 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 ZNF843Q8N446 348 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 TTC9BQ8N6N2 239 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 TP53I13Q8NBR0 393 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-210ENST00000522843 MDGA1Q8NFP4 955 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 BEST2Q8NFU1 509 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 RUFY2Q8WXA3 655 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 HAS1Q92839 578 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 ZMAT2Q96NC0 199 aaKnown RBP7.22□□□□□ -1.25
SDCBP-210ENST00000522843 POLR3FQ9H1D9 316 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-210ENST00000522843 EBF3Q9H4W6 596 aa7.22□□□□□ -1.25
SDCBP-210ENST00000522843 KCNMB3Q9NPA1 279 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms