RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KAT6AQ92794 2004 aa3.83□□□□□ -1.8
VPS13B-209ENST00000521559 ARHGEF17Q96PE2 2063 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ITGB4P16144 1822 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 SBF2Q86WG5 1849 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 SIPA1L3O60292 1781 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 KDM3BQ7LBC6 1761 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 LY75O60449 1722 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 C4BP0C0L5 1744 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 C5P01031 1676 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ATP10DQ9P241 1426 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 UBN2Q6ZU65 1347 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 CAPN8A6NHC0 703 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 FAM227AF5H4B4 570 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 UBE2Q2LH0YL09 131 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 H7C1Q1 480 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 hCG_1984214I3L0E3 225 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 SMIM22K7EJ46 135 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF213O14771 459 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ERC2O15083 957 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 NTSR2O95665 410 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 TUBB4AP04350 444 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 PCCAP05165 728 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 KITP10721 976 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 MYCLP12524 364 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 TRIM27P14373 513 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 NPR1P16066 1061 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 EN2P19622 333 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 KELP23276 732 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 PRKAR1BP31321 381 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 CCT4P50991 539 aaKnown RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF81P51508 661 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 CTBP1Q13363 440 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 GCKRQ14397 625 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 INSCQ1MX18 579 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 CERKLQ49MI3 558 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 PLA1AQ53H76 456 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 DEPDC1Q5TB30 811 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 PRR5LQ6MZQ0 368 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 NPNTQ6UXI9 565 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 NAPRTQ6XQN6 538 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 TRIM72Q6ZMU5 477 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 MAEAQ7L5Y9 396 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 EPM2AIP1Q7L775 607 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 NBPF5PQ86XG9 351 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 FMNL3Q8IVF7 1028 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 IZUMO1Q8IYV9 350 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 CHPFQ8IZ52 775 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 SPARTQ8N0X7 666 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ABRAQ8N0Z2 381 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 MPP5Q8N3R9 675 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 ZBTB34Q8NCN2 500 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 PPP1R35Q8TAP8 253 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 DDB2Q92466 427 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 REPS1Q96D71 796 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 RSPRY1Q96DX4 576 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 C1QTNF7Q9BXJ2 289 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 TMEM60Q9H2L4 133 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 CXorf36Q9H7Y0 433 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 FAM204AQ9H8W3 233 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 A1CFQ9NQ94 594 aaKnown RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 C1orf112Q9NSG2 853 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 TRMT112Q9UI30 125 aaKnown RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 GABRQQ9UN88 632 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 TNNQ9UQP3 1299 aa3.82□□□□□ -1.8
VPS13B-209ENST00000521559 MRPS17Q9Y2R5 130 aaKnown RBP3.82□□□□□ -1.8
VPS13B-209ENST00000521559 RGPD3A6NKT7 1758 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 RGPD4Q7Z3J3 1758 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 UBR2Q8IWV8 1755 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 TJP1Q07157 1748 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CICQ96RK0 1608 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CARMIL3Q8ND23 1372 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 IBTKQ9P2D0 1353 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-209ENST00000521559 UTYO14607 1347 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 ABCC4O15439 1325 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 SH3TC1Q8TE82 1336 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 WDR91A4D1P6 747 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 ISM1B1AKI9 464 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 PRRT4C9JH25 899 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 MYO1FO00160 1098 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 GRM8O00222 908 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 PPP6CO00743 305 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 NPHP1O15259 732 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 PLIN1O60240 522 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 LATS1O95835 1130 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CSF1RP07333 972 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 PRR35P0CG20 571 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 KCNA3P22001 575 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 SLC7A1P30825 629 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CACNB3P54284 484 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 SP2Q02086 613 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 KRTAP1-1Q07627 177 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CCNIQ14094 377 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 C4orf46Q504U0 113 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 MTX3Q5HYI7 312 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 EPHA10Q5JZY3 1008 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 CERCAMQ5T4B2 595 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 FAM102BQ5T8I3 360 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 DENND2CQ68D51 928 aa3.81□□□□□ -1.8
VPS13B-209ENST00000521559 ZNF782Q6ZMW2 699 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms