RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 VIMP08670 466 aaKnown RBP12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 SERPINF2P08697 491 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 PSMD8P48556 350 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 GCNT1Q02742 428 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 IRAK1BP1Q5VVH5 260 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 CEP41Q9BYV8 373 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 OR12D3Q9UGF7 316 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 ZW10O43264 779 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 CHRM3P20309 590 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 ZNF131P52739 623 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 ETF1P62495 437 aaKnown RBP12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 CHST9Q7L1S5 443 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 RPAINQ86UA6 219 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 LEMD2Q8NC56 503 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 WNT8BQ93098 351 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 DUSP16Q9BY84 665 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 B3GNT5Q9BYG0 378 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 GOLPH3Q9H4A6 298 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 SQORQ9Y6N5 450 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 CD72P21854 359 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 BRD3Q15059 726 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 SLC18A3Q16572 532 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 CYP2S1Q96SQ9 504 aa12.21□□□□□ -0.45
PCDHGB6-201ENST00000520790 THSD7AQ9UPZ6 1657 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 ASGR2P07307 311 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 AMD1P17707 334 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 CYP3A5P20815 502 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 NOS2P35228 1153 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 SNRPD1P62314 119 aaKnown RBP12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 PDCLQ13371 301 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 SNAP47Q5SQN1 464 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 FAXCQ5TGI0 409 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 ANKRD42Q8N9B4 389 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 RNF217Q8TC41 542 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 FAM136AQ96C01 138 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 ZFYVE19Q96K21 471 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 TSPAN18Q96SJ8 248 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 HPSEQ9Y251 543 aa12.21□□□□□ -0.46
PCDHGB6-201ENST00000520790 TRIM43BA6NCK2 446 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 GMNNO75496 209 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 TUBBP07437 444 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 SERPINA4P29622 427 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 POLR2LP62875 67 aaKnown RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 MPPE1Q53F39 396 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 TPRG1Q6ZUI0 275 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 TRMT11Q7Z4G4 463 aaKnown RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 SCAMP5Q8TAC9 235 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 MGARPQ8TDB4 240 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 PIGKQ92643 395 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 TRIM43Q96BQ3 446 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 RASSF4Q9H2L5 321 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 DNAJC16Q9Y2G8 782 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 C2orf81A6NN90 581 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 TBX18O95935 607 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 C1RP00736 705 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 PDGFRLQ15198 375 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 PLEKHG4Q58EX7 1191 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 ZNF366Q8N895 744 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 ANKS4BQ8N8V4 417 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 PRCCQ92733 491 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 SUSD3Q96L08 255 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 THAP2Q9H0W7 228 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 CAPN11Q9UMQ6 739 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 SLC1A1P43005 524 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 CELF5Q8N6W0 485 aaKnown RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 ATOH1Q92858 354 aaPredicted RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 RPL10LQ96L21 214 aaKnown RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 DPEP3Q9H4B8 488 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 NDOR1Q9UHB4 597 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 KCNK1O00180 336 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 COMTP21964 271 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 CAP1Q01518 475 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 BYSLQ13895 437 aaKnown RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 TEAD4Q15561 434 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 RCOR2Q8IZ40 523 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 PPHLN1Q8NEY8 458 aaKnown RBP12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 SIPA1Q96FS4 1042 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 PANX2Q96RD6 677 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 ADGRE3Q9BY15 652 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 AIPL1Q9NZN9 384 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 MPP6Q9NZW5 540 aa12.2□□□□□ -0.46
PCDHGB6-201ENST00000520790 C9IYK1 514 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 SCAMP1O15126 338 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 TGFB1I1O43294 461 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 STBD1O95210 358 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 ATP4AP20648 1035 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 VIPR2P41587 438 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 LRRC32Q14392 662 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 C15orf59Q2T9L4 293 aaPredicted RBP12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 ITPRIPL2Q3MIP1 535 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 LHX8Q68G74 356 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 KLC3Q6P597 504 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 KLHDC9Q8NEP7 349 aa12.19□□□□□ -0.46
PCDHGB6-201ENST00000520790 OSBPL8Q9BZF1 889 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms