RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 TBC1D3BA6NDS4 549 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TBC1D3FA6NER0 549 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 TBC1D3LB9A6J9 549 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 UBE2CO00762 179 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 CTIFO43310 598 aaKnown RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 ADAM20O43506 726 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TULP3O75386 442 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 ITGB2P05107 769 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 PDHA1P08559 390 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TBC1D3HP0C7X1 549 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 CD72P21854 359 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 FGFR4P22455 802 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 IGFBP6P24592 240 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 ABCD1P33897 745 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 NEXNQ0ZGT2 675 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TMEM115Q12893 351 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 AIMP1Q12904 312 aaKnown RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 RIN1Q13671 783 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 SLC10A5Q5PT55 438 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 KAZNQ674X7 775 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TBC1D3GQ6DHY5 549 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TBC1D3CQ6IPX1 549 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 EFCAB12Q6NXP0 572 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 INO80CQ6PI98 192 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 MON1AQ86VX9 555 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 LINC00346Q8IVM7 164 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TBC1D3Q8IZP1 549 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 AFAP1L1Q8TED9 768 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 MZB1Q8WU39 189 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 KCNJ9Q92806 393 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 VPS33AQ96AX1 596 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 RNFT2Q96EX2 444 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 ZNF512Q96ME7 567 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 WDFY2Q96P53 400 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 PIGSQ96S52 555 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 ABHD1Q96SE0 405 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 TCF25Q9BQ70 676 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 KLHL4Q9C0H6 718 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 ZNF552Q9H707 407 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 ERVK-5Q9HDB9 667 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 ABCF3Q9NUQ8 709 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 SEL1LQ9UBV2 794 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 SLC25A10Q9UBX3 287 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 LIMA1Q9UHB6 759 aaKnown RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 MBD1Q9UIS9 605 aaPredicted RBP3.94□□□□□ -1.78
SREK1-208ENST00000520580 SLC12A4Q9UP95 1085 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 NEU2Q9Y3R4 380 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 PCDHB2Q9Y5E7 798 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 ENTPD2Q9Y5L3 495 aa3.94□□□□□ -1.78
SREK1-208ENST00000520580 KDM3AQ9Y4C1 1321 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 FAM237BA0A1B0GVD1 139 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 FAM90A7PA6NKC0 464 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SAC3D1A6NKF1 404 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 FAM90A22PA8MWA6 464 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 FAM90A12PA8MX19 464 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 FAM90A23PA8MXZ1 464 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PRR5-ARHGAP8B1AHC4 643 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SH2B2O14492 632 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 MTA2O94776 668 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PDE8BO95263 885 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 URODP06132 367 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 NR2F1P10589 423 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 CXCR5P32302 372 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 MTHFSP49914 203 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 IRAK1P51617 712 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 UFM1P61960 85 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 EPS8Q12929 822 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SCARB2Q14108 478 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 IRF3Q14653 427 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 AAK1Q2M2I8 961 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 CD300EQ496F6 205 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 RUNDC3AQ59EK9 446 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 ZMAT1Q5H9K5 638 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PRSS36Q5K4E3 855 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SH2D4BQ5SQS7 431 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 ZNF362Q5T0B9 420 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 TMEM132EQ6IEE7 984 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 INTS5Q6P9B9 1019 aaKnown RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 IL27RAQ6UWB1 636 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 GPRIN1Q7Z2K8 1008 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PRPF39Q86UA1 669 aaKnown RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 ELOA2Q8IYF1 753 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 NDUFAF2Q8N183 169 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SYNE4Q8N205 404 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 CARNMT1Q8N4J0 409 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PLD5Q8N7P1 536 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PTGR2Q8N8N7 351 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 AVL9Q8NBF6 648 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 GOT1L1Q8NHS2 421 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 CDHR1Q96JP9 859 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 ZNF668Q96K58 619 aaPredicted RBP3.93□□□□□ -1.78
SREK1-208ENST00000520580 ZSWIM1Q9BR11 485 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PTDSS2Q9BVG9 487 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 HEMGNQ9BXL5 484 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 TMEM168Q9H0V1 697 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SLC32A1Q9H598 525 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 PDE11AQ9HCR9 933 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 FBXO28Q9NVF7 368 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 NFU1Q9UMS0 254 aa3.93□□□□□ -1.78
SREK1-208ENST00000520580 SUFUQ9UMX1 484 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms