RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-209ENST00000519141 SEC14L1Q92503 715 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 CLP1Q92989 425 aaKnown RBP12.86□□□□□ -0.35
SPIDR-209ENST00000519141 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
SPIDR-209ENST00000519141 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 SMOC2Q9H3U7 446 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 NMUR1Q9HB89 426 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPIDR-209ENST00000519141 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 GMIPQ9P107 970 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 HSFX1Q9UBD0 423 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 NFU1Q9UMS0 254 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 ZNF148Q9UQR1 794 aa12.86□□□□□ -0.35
SPIDR-209ENST00000519141 SPTBN5Q9NRC6 3674 aaKnown RBP12.85□□□□□ -0.35
SPIDR-209ENST00000519141 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 H3BRJ5 948 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 MCF2LO15068 1137 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 IRAK2O43187 625 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 TLL1O43897 1013 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 ABLIM3O94929 683 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 TGM2P21980 687 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 IL4RP24394 825 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 CXCR3P49682 368 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 PTK6Q13882 451 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 DUPD1Q68J44 220 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 EMBQ6PCB8 327 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 Q7L0L9 218 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 GSTA5Q7RTV2 222 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 DDX42Q86XP3 938 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPIDR-209ENST00000519141 PCDH19Q8TAB3 1148 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 SLC35B2Q8TB61 432 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 GIPC2Q8TF65 315 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 AENQ8WTP8 325 aaKnown RBP12.85□□□□□ -0.35
SPIDR-209ENST00000519141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.35
SPIDR-209ENST00000519141 RNF34Q969K3 372 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 CSPG4P5Q96PW8 444 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
SPIDR-209ENST00000519141 FBXW11Q9UKB1 542 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 SSX2IPQ9Y2D8 614 aa12.85□□□□□ -0.35
SPIDR-209ENST00000519141 IGLV3-25P01717 112 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 ITGAVP06756 1048 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 ATF2P15336 505 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 PECAM1P16284 738 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 ZFXP17010 805 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 CA8P35219 290 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 TNNT3P45378 269 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 PGFP49763 221 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 TAF10Q12962 218 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 MTMR3Q13615 1198 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 RAB33AQ14088 237 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 TRADDQ15628 312 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 SLC9A4Q6AI14 798 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 MSANTD2Q6P1R3 559 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 PYROXD2Q8N2H3 581 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 DEFB123Q8N688 67 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 PQLC3Q8N755 202 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 AUTS2Q8WXX7 1259 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 P3H4Q92791 437 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 SERPINB11Q96P15 392 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 ZBP1Q9H171 429 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 CYP4F11Q9HBI6 524 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 TMPRSS4Q9NRS4 437 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 TMEM51Q9NW97 253 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 ZNF446Q9NWS9 450 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 CLIC5Q9NZA1 410 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 FNIP2Q9P278 1114 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 SAE1Q9UBE0 346 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 ASIC3Q9UHC3 531 aa12.84□□□□□ -0.35
SPIDR-209ENST00000519141 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
SPIDR-209ENST00000519141 SEC24AO95486 1093 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 CTSAP10619 480 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 GOT1P17174 413 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 ELF1P32519 619 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 DRG2P55039 364 aaKnown RBP12.83□□□□□ -0.35
SPIDR-209ENST00000519141 EIF3EP60228 445 aaKnown RBP12.83□□□□□ -0.35
SPIDR-209ENST00000519141 NOMO1Q15155 1222 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 OASLQ15646 514 aaKnown RBP12.83□□□□□ -0.35
SPIDR-209ENST00000519141 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.35
SPIDR-209ENST00000519141 BRMS1LQ5PSV4 323 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 PLD5Q8N7P1 536 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 KLHL23Q8NBE8 558 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 CASP10Q92851 521 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 TTLL2Q9BWV7 592 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 MAGEB5Q9BZ81 275 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 TKTL2Q9H0I9 626 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 PRDM16Q9HAZ2 1276 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 OLA1Q9NTK5 396 aaKnown RBP12.83□□□□□ -0.35
SPIDR-209ENST00000519141 OSER1Q9NX31 292 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 MAGED2Q9UNF1 606 aaPredicted RBP12.83□□□□□ -0.35
SPIDR-209ENST00000519141 SNX24Q9Y343 169 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 YIPF1Q9Y548 306 aa12.83□□□□□ -0.35
SPIDR-209ENST00000519141 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
SPIDR-209ENST00000519141 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
SPIDR-209ENST00000519141 PRRG1O14668 218 aa12.83□□□□□ -0.36
SPIDR-209ENST00000519141 MSI1O43347 362 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms