RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 IQCF2Q8IXL9 164 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 FAM109AQ8N4B1 249 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 ZMIZ2Q8NF64 920 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 RUFY2Q8WXA3 655 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 JAKMIP1Q96N16 626 aaKnown RBP6.46□□□□□ -1.38
SQLE-203ENST00000518931 SLF1Q9BQI6 1058 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 MESP1Q9BRJ9 268 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 VPS33BQ9H267 617 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 A1CFQ9NQ94 594 aaKnown RBP6.46□□□□□ -1.38
SQLE-203ENST00000518931 ITM2CQ9NQX7 267 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 PLSCR4Q9NRQ2 329 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 ZSCAN32Q9NX65 697 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 ORC3Q9UBD5 711 aaPredicted RBP6.46□□□□□ -1.38
SQLE-203ENST00000518931 MAGED2Q9UNF1 606 aaPredicted RBP6.46□□□□□ -1.38
SQLE-203ENST00000518931 MRPS17Q9Y2R5 130 aaKnown RBP6.46□□□□□ -1.38
SQLE-203ENST00000518931 MTF2Q9Y483 593 aaPredicted RBP6.46□□□□□ -1.38
SQLE-203ENST00000518931 ATP6V0A2Q9Y487 856 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 FER1L4A9Z1Z3 1794 aa6.46□□□□□ -1.38
SQLE-203ENST00000518931 TRIM43BA6NCK2 446 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 VWC2LB2RUY7 222 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 PLOD2O00469 737 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 PPM1DO15297 605 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 STARD3NLO95772 234 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 ABCD1P33897 745 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 HSPA4P34932 840 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 WNT3P56703 355 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 UBXN1Q04323 297 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 MRPL28Q13084 256 aaKnown RBP6.45□□□□□ -1.38
SQLE-203ENST00000518931 ZNF169Q14929 603 aaPredicted RBP6.45□□□□□ -1.38
SQLE-203ENST00000518931 PTPRRQ15256 657 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 DCAF12L1Q5VU92 463 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 KIAA0895LQ68EN5 471 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 TATDN1Q6P1N9 297 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 CCDC91Q7Z6B0 441 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 MICU3Q86XE3 530 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 EPHX4Q8IUS5 362 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 ZNF527Q8NB42 609 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 MNS1Q8NEH6 495 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 SLC9A6Q92581 669 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 KIAA1191Q96A73 305 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 TRIM43Q96BQ3 446 aaPredicted RBP6.45□□□□□ -1.38
SQLE-203ENST00000518931 NMD3Q96D46 503 aaKnown RBP6.45□□□□□ -1.38
SQLE-203ENST00000518931 TMEM41AQ96HV5 264 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 AGAP2Q99490 1192 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 TXLNGYQ9BZA5 131 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 GRPEL1Q9HAV7 217 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 KLC4Q9NSK0 619 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 HPF1Q9NWY4 346 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 COL20A1Q9P218 1284 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 AASSQ9UDR5 926 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 AFF4Q9UHB7 1163 aaKnown RBP6.45□□□□□ -1.38
SQLE-203ENST00000518931 PCSK1NQ9UHG2 260 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 SERTAD3Q9UJW9 196 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 NDRG4Q9ULP0 352 aaKnown RBP6.45□□□□□ -1.38
SQLE-203ENST00000518931 TBC1D30Q9Y2I9 924 aa6.45□□□□□ -1.38
SQLE-203ENST00000518931 ADM5C9JUS6 153 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 PYCARD-AS1I3L0S3 204 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 NDC80O14777 642 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 KIAA0754O94854 1291 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 RHOP08100 348 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 PDHA1P08559 390 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 ATP5DP30049 168 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 LRPAP1P30533 357 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 CXCR5P32302 372 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 PRIM2P49643 509 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 MAPK10P53779 464 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 RPS16P62249 146 aaKnown RBP6.44□□□□□ -1.38
SQLE-203ENST00000518931 E2F2Q14209 437 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 STARD3Q14849 445 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 MGAT5BQ3V5L5 792 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 GALNT17Q6IS24 598 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 OLFML1Q6UWY5 402 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 MFSD6Q6ZSS7 791 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 GAS2L3Q86XJ1 694 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 SLC44A2Q8IWA5 706 aaPredicted RBP6.44□□□□□ -1.38
SQLE-203ENST00000518931 RNF168Q8IYW5 571 aaPredicted RBP6.44□□□□□ -1.38
SQLE-203ENST00000518931 OR56A3Q8NH54 315 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 LILRB1Q8NHL6 650 aaPredicted RBP6.44□□□□□ -1.38
SQLE-203ENST00000518931 ACTRT2Q8TDY3 377 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 TAF4BQ92750 862 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 CNDP2Q96KP4 475 aaKnown RBP6.44□□□□□ -1.38
SQLE-203ENST00000518931 FAM210AQ96ND0 272 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 TRPV4Q9HBA0 871 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 SERHLQ9NQF3 203 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 HOXC10Q9NYD6 342 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 DACT1Q9NYF0 836 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 DKK3Q9UBP4 350 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 SSX2IPQ9Y2D8 614 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 PAXBP1Q9Y5B6 917 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 SNX13Q9Y5W8 968 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 ADGRA2Q96PE1 1338 aa6.44□□□□□ -1.38
SQLE-203ENST00000518931 COL11A2P13942 1736 aaPredicted RBP6.43□□□□□ -1.38
SQLE-203ENST00000518931 SLC4A1P02730 911 aa6.43□□□□□ -1.38
SQLE-203ENST00000518931 MT-ND3P03897 115 aa6.43□□□□□ -1.38
SQLE-203ENST00000518931 EEF2P13639 858 aaKnown RBP6.43□□□□□ -1.38
SQLE-203ENST00000518931 CNTFP26441 200 aa6.43□□□□□ -1.38
SQLE-203ENST00000518931 LIFRP42702 1097 aa6.43□□□□□ -1.38
SQLE-203ENST00000518931 LIMK1P53667 647 aa6.43□□□□□ -1.38
SQLE-203ENST00000518931 SP2Q02086 613 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms