RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.91■■□□□ 1.265e-15■□□□□ 10.1
VEGFA-217ENST00000518538 F5P12259 2224 aa22.91■■□□□ 1.26
VEGFA-217ENST00000518538 IRAK2O43187 625 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 GALR2O43603 387 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-217ENST00000518538 TRUB2O95900 331 aaKnown RBP22.9■■□□□ 1.26
VEGFA-217ENST00000518538 COL9A1P20849 921 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 DRD1P21728 446 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 ZBED6P86452 979 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 FAM102AQ5T9C2 384 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-217ENST00000518538 TPGS1Q6ZTW0 290 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 SYN2Q92777 582 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-217ENST00000518538 SLC39A13Q96H72 371 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 FCRL2Q96LA5 508 aaPredicted RBP22.9■■□□□ 1.26
VEGFA-217ENST00000518538 IER2Q9BTL4 223 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 CHRDQ9H2X0 955 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 FBRSL1Q9HCM7 1045 aaKnown RBP22.9■■□□□ 1.26
VEGFA-217ENST00000518538 WDR35Q9P2L0 1181 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 STOML2Q9UJZ1 356 aa22.9■■□□□ 1.26
VEGFA-217ENST00000518538 GYPCP04921 128 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 TNFAIP3P21580 790 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 NOS2P35228 1153 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 PITX1P78337 314 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-217ENST00000518538 KLHL30Q0D2K2 578 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 C12orf40Q86WS4 652 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 PHF13Q86YI8 300 aaPredicted RBP22.89■■□□□ 1.25
VEGFA-217ENST00000518538 ETFBKMTQ8IXQ9 262 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 SYNPOQ8N3V7 929 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 OLIG1Q8TAK6 271 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 C11orf70Q9BRQ4 267 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 BBS2Q9BXC9 721 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 HAUS4Q9H6D7 363 aa22.89■■□□□ 1.25
VEGFA-217ENST00000518538 RBM12Q9NTZ6 932 aaKnown RBP22.89■■□□□ 1.25
VEGFA-217ENST00000518538 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-217ENST00000518538 NEDD8-MDP1E9PL57 170 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 GOLGA8SH3BPF8 625 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 EGFP01133 1207 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 MATKP42679 507 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 SLC11A2P49281 568 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 GSCP56915 257 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-217ENST00000518538 PTP4A2Q12974 167 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 EIF4EBP2Q13542 120 aaPredicted RBP22.88■■□□□ 1.25
VEGFA-217ENST00000518538 SPECC1LQ69YQ0 1117 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 SARM1Q6SZW1 724 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 ARCQ7LC44 396 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 CPLX3Q8WVH0 158 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 AZIN2Q96A70 460 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 PNKPQ96T60 521 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 FAM204AQ9H8W3 233 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 RRN3Q9NYV6 651 aa22.88■■□□□ 1.25
VEGFA-217ENST00000518538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.88■■□□□ 1.254e-6■□□□□ 10.5
VEGFA-217ENST00000518538 LUC7L2Q9Y383 392 aaKnown RBP22.88■■□□□ 1.25
VEGFA-217ENST00000518538 CACNG3O60359 315 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 CALB1P05937 261 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 TYRP14679 529 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 GBP1P32455 592 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 SLC6A11P48066 632 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 RNASE9P60153 205 aaKnown RBP22.87■■□□□ 1.25
VEGFA-217ENST00000518538 TRIM14Q14142 442 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 FBXO43Q4G163 708 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 ADGRF1Q5T601 910 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 PPP1R2P3Q6NXS1 205 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 MON1BQ7L1V2 547 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 ZNF571Q7Z3V5 609 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-217ENST00000518538 XPO6Q96QU8 1125 aaKnown RBP22.87■■□□□ 1.25
VEGFA-217ENST00000518538 RBSNQ9H1K0 784 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 SPATA6Q9NWH7 488 aaPredicted RBP22.87■■□□□ 1.25
VEGFA-217ENST00000518538 DDIT4Q9NX09 232 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 ADAM22Q9P0K1 906 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 TMEM59LQ9UK28 342 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 STAP1Q9ULZ2 295 aa22.87■■□□□ 1.25
VEGFA-217ENST00000518538 ACSL4O60488 711 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 TULP3O75386 442 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 PENKP01210 267 aaPredicted RBP22.86■■□□□ 1.25
VEGFA-217ENST00000518538 APOEP02649 317 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 CYBBP04839 570 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 C1QBPQ07021 282 aaKnown RBP22.86■■□□□ 1.25
VEGFA-217ENST00000518538 PREPLQ4J6C6 727 aaPredicted RBP22.86■■□□□ 1.25
VEGFA-217ENST00000518538 ACAD10Q6JQN1 1059 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 C1orf210Q8IVY1 113 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 VSTM4Q8IW00 320 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 NAT16Q8N8M0 369 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 PRSS33Q8NF86 280 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 NPY6RQ99463 290 aa22.86■■□□□ 1.25
VEGFA-217ENST00000518538 METTL5Q9NRN9 209 aaKnown RBP22.86■■□□□ 1.25
VEGFA-217ENST00000518538 BZW2Q9Y6E2 419 aaKnown RBP22.86■■□□□ 1.25
VEGFA-217ENST00000518538 GFRA2O00451 464 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 SLC2A3P11169 496 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 SKILP12757 684 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 CASP14P31944 242 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 FLT3P36888 993 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 MTAPQ13126 283 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 ZC3H12AQ5D1E8 599 aaKnown RBP22.85■■□□□ 1.25
VEGFA-217ENST00000518538 FYB2Q5VWT5 728 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 MAMSTRQ6ZN01 415 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 Q6ZS52 159 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 PHTF2Q8N3S3 785 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 EZH1Q92800 747 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-217ENST00000518538 BHMTQ93088 406 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 NT5C3BQ969T7 300 aa22.85■■□□□ 1.25
VEGFA-217ENST00000518538 P2RY11Q96G91 374 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms