RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 USP3Q9Y6I4 520 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 MCM3APO60318 1980 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 COL1A2P08123 1366 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 HACD1B0YJ81 288 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 B2RBV5 119 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 SPECC1L-ADORA2AF8WAN1 911 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 H3BRJ5 948 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 CYB561D2O14569 222 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 KIF3CO14782 793 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 PEX10O60683 326 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 USP2O75604 605 aaPredicted RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 GABBR2O75899 941 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 AMPD1P23109 780 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 CPOXP36551 454 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 TUBP50607 506 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 AQP5P55064 265 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 SNX16P57768 344 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 THOC5Q13769 683 aaKnown RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 BMPR2Q13873 1038 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 VGLL4Q14135 290 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 TMEM132AQ24JP5 1023 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 RABGAP1LQ5R372 815 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 SYCP2LQ5T4T6 812 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 FAXCQ5TGI0 409 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 TMCO4Q5TGY1 634 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 ARHGAP17Q68EM7 881 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 TRMT10BQ6PF06 316 aaKnown RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 SLC26A9Q7LBE3 791 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 CCNJLQ8IV13 435 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 ULK2Q8IYT8 1036 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 HACE1Q8IYU2 909 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 NDUFAF2Q8N183 169 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 MPP5Q8N3R9 675 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 PDCD7Q8N8D1 485 aaKnown RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 PPFIBP2Q8ND30 876 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 FBXO27Q8NI29 283 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 GATA6Q92908 595 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 NR1H4Q96RI1 486 aaPredicted RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 PCMTD2Q9NV79 361 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 GPATCH2LQ9NWQ4 482 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 MTMR10Q9NXD2 777 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 DPP3Q9NY33 737 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 GGA3Q9NZ52 723 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 RCOR3Q9P2K3 495 aaPredicted RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 PPARGC1AQ9UBK2 798 aaKnown RBP6.89□□□□□ -1.31
CDH12-203ENST00000517378 EMCNQ9ULC0 261 aa6.89□□□□□ -1.31
CDH12-203ENST00000517378 DICER1Q9UPY3 1922 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 SF3B1O75533 1304 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH12-203ENST00000517378 TSC2P49815 1807 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 PAPSS1O43252 624 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 MAP3K7O43318 606 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 AHCYL1O43865 530 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 GLRA3O75311 464 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 DGKIO75912 1065 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 ENO1P06733 434 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 PDHA1P08559 390 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 MYL4P12829 197 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 ARF4P18085 180 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 FDFT1P37268 417 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 VASPP50552 380 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 SLC10A2Q12908 348 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 STX3Q13277 289 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 NCBP2-AS2Q69YL0 99 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 TMEM154Q6P9G4 183 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 AAGABQ6PD74 315 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 RIPOR1Q6ZS17 1223 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 EEPD1Q7L9B9 569 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 DHX37Q8IY37 1157 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 KBTBD2Q8IY47 623 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 ZNF483Q8TF39 744 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 DEPDC1BQ8WUY9 529 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 ISL2Q96A47 359 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 PANX3Q96QZ0 392 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 CCDC28BQ9BUN5 200 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 VCXQ9H320 206 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 FAM96AQ9H5X1 160 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 ERAP1Q9NZ08 941 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 SLC7A8Q9UHI5 535 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 TRIP11Q15643 1979 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 GRAP2O75791 330 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 CIB2O75838 187 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 ALDOAP04075 364 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 FGF3P11487 239 aaPredicted RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 ANPEPP15144 967 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 GRM5P41594 1212 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 SESN3P58005 492 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 BTKQ06187 659 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 INSCQ1MX18 579 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 TEDDM1Q5T9Z0 273 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 LRRC8BQ6P9F7 803 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 UNC93AQ86WB7 457 aa6.88□□□□□ -1.31
CDH12-203ENST00000517378 PSTKQ8IV42 348 aaKnown RBP6.88□□□□□ -1.31
CDH12-203ENST00000517378 OR6Y1Q8NGX8 325 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms