RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 FYNP06241 537 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 LCP1P13796 627 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 WASP42768 502 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 GPD2P43304 727 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 ENPP2Q13822 863 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 STILQ15468 1287 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 GEN1Q17RS7 908 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 TCEAL6Q6IPX3 200 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 MSANTD2Q6P1R3 559 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 NUDT18Q6ZVK8 323 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 SIX6OS1Q8N1H7 587 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 HMGB4Q8WW32 186 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 IRGQQ8WZA9 623 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 TCEAL3Q969E4 200 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 HSFY1Q96LI6 401 aa18.48■□□□□ 0.55
SFXN1-212ENST00000515791 HBS1LQ9Y450 684 aaKnown RBP18.48■□□□□ 0.55
SFXN1-212ENST00000515791 WASH3PC4AMC7 463 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 M0QYV0 167 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 PIK3R2O00459 728 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 IGLV3-27P01718 113 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 HOXB2P14652 356 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 GBP1P32455 592 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 CREB5Q02930 508 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
SFXN1-212ENST00000515791 NCOR2Q9Y618 2525 aa18.47■□□□□ 0.55
SFXN1-212ENST00000515791 BECN2A8MW95 431 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 MSI1O43347 362 aaKnown RBP18.46■□□□□ 0.55
SFXN1-212ENST00000515791 CAVIN2O95810 425 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 SLC9A1P19634 815 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 APBA1Q02410 837 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 TMEM215Q68D42 235 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 RNF43Q68DV7 783 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 GJB7Q6PEY0 223 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 CHPFQ8IZ52 775 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 IPO4Q8TEX9 1081 aaKnown RBP18.46■□□□□ 0.55
SFXN1-212ENST00000515791 UBE2TQ9NPD8 197 aaPredicted RBP18.46■□□□□ 0.55
SFXN1-212ENST00000515791 ACP6Q9NPH0 428 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 CACNA2D2Q9NY47 1150 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 CYTH4Q9UIA0 394 aa18.46■□□□□ 0.55
SFXN1-212ENST00000515791 FGFR1OPO95684 399 aaKnown RBP18.45■□□□□ 0.54
SFXN1-212ENST00000515791 LATS1O95835 1130 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 NDUFV2P19404 249 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 HOXD9P28356 352 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-212ENST00000515791 MEA1Q16626 185 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 AASDHQ4L235 1098 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-212ENST00000515791 DPY19L2P1Q6NXN4 242 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 DENND1BQ6P3S1 775 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 TRIM65Q6PJ69 517 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 C12orf50Q8NA57 414 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-212ENST00000515791 RNF139Q8WU17 664 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 CRACR2AQ9BSW2 395 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 SLC4A5Q9BY07 1137 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 CLSTN2Q9H4D0 955 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 CALCOCO1Q9P1Z2 691 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 THAP10Q9P2Z0 257 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-212ENST00000515791 RAD54BQ9Y620 910 aa18.45■□□□□ 0.54
SFXN1-212ENST00000515791 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 LTFP02788 710 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 IL12RB1P42701 662 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 PTGER3P43115 390 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 SPDYCQ5MJ68 293 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 ADGRF1Q5T601 910 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 STPG1Q5TH74 334 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 CLEC17AQ6ZS10 378 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
SFXN1-212ENST00000515791 TMEFF1Q8IYR6 380 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 MLKLQ8NB16 471 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 STK32AQ8WU08 396 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 ZNF606Q8WXB4 792 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 SLC2A11Q9BYW1 496 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 SLC6A17Q9H1V8 727 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 SIX2Q9NPC8 291 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 CD93Q9NPY3 652 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 TMEM74BQ9NUR3 256 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 BCCIPQ9P287 314 aaKnown RBP eCLIP18.44■□□□□ 0.54
SFXN1-212ENST00000515791 AJAP1Q9UKB5 411 aaPredicted RBP18.44■□□□□ 0.54
SFXN1-212ENST00000515791 STON1Q9Y6Q2 735 aa18.44■□□□□ 0.54
SFXN1-212ENST00000515791 MUC22E2RYF6 1773 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-212ENST00000515791 IGHV1OR15-9A0A0B4J2B8 117 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 GTPBP10A4D1E9 387 aaKnown RBP18.43■□□□□ 0.54
SFXN1-212ENST00000515791 PATE3B3GLJ2 98 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 FBXO21O94952 628 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 HLA-FP30511 346 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 HARS2P49590 506 aaKnown RBP18.43■□□□□ 0.54
SFXN1-212ENST00000515791 SGSHP51688 502 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 MPPE1Q53F39 396 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 FAM133BQ5BKY9 247 aaKnown RBP18.43■□□□□ 0.54
SFXN1-212ENST00000515791 PEAR1Q5VY43 1037 aaPredicted RBP18.43■□□□□ 0.54
SFXN1-212ENST00000515791 ENOSF1Q7L5Y1 443 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 SCUBE3Q8IX30 993 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 PGBD3Q8N328 593 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 DDI1Q8WTU0 396 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 MRGPRX1Q96LB2 322 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 MIS12Q9H081 205 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 ELOVL2Q9NXB9 296 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 CEP192Q8TEP8 1941 aa18.43■□□□□ 0.54
SFXN1-212ENST00000515791 LNP1A1A4G5 178 aa18.42■□□□□ 0.54
SFXN1-212ENST00000515791 TSPAN3O60637 253 aa18.42■□□□□ 0.54
SFXN1-212ENST00000515791 CYBBP04839 570 aa18.42■□□□□ 0.54
SFXN1-212ENST00000515791 KRT5P13647 590 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms