RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PHTF1Q9UMS5 762 aa3.79□□□□□ -1.8
HERC4-215ENST00000515753 BAZ1BQ9UIG0 1483 aaKnown RBP3.79□□□□□ -1.8
HERC4-215ENST00000515753 BAZ1AQ9NRL2 1556 aaPredicted RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 IGKV2D-30A0A075B6S6 120 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 MYMKA6NI61 221 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 E5RJQ4 531 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 SOCS2O14508 198 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 DHHO43323 396 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 IFIT2P09913 472 aaKnown RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 NBPF7P0C2Y1 421 aaPredicted RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 TMEM225BP0DP42 221 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 TNFSF4P23510 183 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 PAX3P23760 479 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 NTSR1P30989 418 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 CCKARP32238 428 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 GPC5P78333 572 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 GPS1Q13098 491 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 DNASE1L3Q13609 305 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 ATP1A4Q13733 1029 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 KCNJ12Q14500 433 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 DGKKQ5KSL6 1271 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 MEX3CQ5U5Q3 659 aaKnown RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 HIBCHQ6NVY1 386 aaPredicted RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 SHC4Q6S5L8 630 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 CCDC28AQ8IWP9 274 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 CLASRPQ8N2M8 674 aaKnown RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 C12orf76Q8N812 135 aaPredicted RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 MAFAQ8NHW3 353 aaPredicted RBP3.78□□□□□ -1.8
HERC4-215ENST00000515753 ABHD5Q8WTS1 349 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 PPM1EQ8WY54 764 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 EVI5LQ96CN4 794 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 ARPC5LQ9BPX5 153 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 TMEM79Q9BSE2 394 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 MAF1Q9H063 256 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 TM7SF3Q9NS93 570 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 MAFFQ9ULX9 164 aa3.78□□□□□ -1.8
HERC4-215ENST00000515753 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 GXYLT2A0PJZ3 443 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 TMEM232C9JQI7 657 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 ADAM10O14672 748 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 HNRNPDLO14979 420 aaKnown RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 CCNT2O60583 730 aaKnown RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 COQ9O75208 318 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 MBPP02686 304 aaPredicted RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 ATP5F1P24539 256 aaPredicted RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 THBS4P35443 961 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 HTR3AP46098 478 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 RGS19P49795 217 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 DEUP1Q05D60 604 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 NSUN2Q08J23 767 aaKnown RBP eCLIP3.77□□□□□ -1.81
HERC4-215ENST00000515753 KCNB1Q14721 858 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 MAPKAPK3Q16644 382 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 LONRF1Q17RB8 773 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 ARL13BQ3SXY8 428 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 FAM90A2PQ658T7 463 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 ARL6IP4Q66PJ3 421 aaKnown RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 GRHL2Q6ISB3 625 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 VSTM1Q6UX27 236 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 CLEC9AQ6UXN8 241 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 SERPINA13PQ6UXR4 307 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 DCDC5Q6ZRR9 648 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 CCDC150Q8NCX0 1101 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 DEPTORQ8TB45 409 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 PIGOQ8TEQ8 1089 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 OVCA2Q8WZ82 227 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 LRRC46Q96FV0 321 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 P2RY11Q96G91 374 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 RIPOR3Q96MK2 946 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 CINPQ9BW66 212 aaPredicted RBP3.77□□□□□ -1.81
HERC4-215ENST00000515753 AS3MTQ9HBK9 375 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 RGL1Q9NZL6 768 aa3.77□□□□□ -1.81
HERC4-215ENST00000515753 CCDC189A1A4V9 331 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 FCHO1O14526 889 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 NCK2O43639 380 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 GCATO75600 419 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 GLP2RO95838 553 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 MATN1P21941 496 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 EEF1GP26641 437 aaKnown RBP3.76□□□□□ -1.81
HERC4-215ENST00000515753 BTKQ06187 659 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 POU5F1BQ06416 359 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 MPEG1Q2M385 716 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 GRAMD1BQ3KR37 738 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 FAM209BQ5JX69 171 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 RRAGBQ5VZM2 374 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 TMEM65Q6PI78 240 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 DEF8Q6ZN54 512 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 SPICE1Q8N0Z3 855 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 FSTL5Q8N475 847 aaPredicted RBP3.76□□□□□ -1.81
HERC4-215ENST00000515753 C11orf44Q8N8P7 122 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 NSMCE1Q8WV22 266 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 GJA10Q969M2 543 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 SGCZQ96LD1 299 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 CCDC17Q96LX7 622 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 FAM118BQ9BPY3 351 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 STK33Q9BYT3 514 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 PCDHAC1Q9H158 963 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 VPS45Q9NRW7 570 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 LPAR3Q9UBY5 353 aa3.76□□□□□ -1.81
HERC4-215ENST00000515753 ASAP1Q9ULH1 1129 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms