RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 LMAN1LQ9HAT1 526 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 RRN3Q9NYV6 651 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.04■■□□□ 1.92
DDR1-279ENST00000515529 STAP1Q9ULZ2 295 aa27.04■■□□□ 1.92
DDR1-279ENST00000515529 NEDD8-MDP1E9PL57 170 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 LATS1O95835 1130 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 APOEP02649 317 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 CYBBP04839 570 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 CASP14P31944 242 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 NOS2P35228 1153 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 MATKP42679 507 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 E4F1Q66K89 784 aaPredicted RBP27.03■■□□□ 1.92
DDR1-279ENST00000515529 SARM1Q6SZW1 724 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 TMEM25Q86YD3 366 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 PHF13Q86YI8 300 aaPredicted RBP27.03■■□□□ 1.92
DDR1-279ENST00000515529 VSTM4Q8IW00 320 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 RNF34Q969K3 372 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 CHFRQ96EP1 664 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 DDIT4Q9NX09 232 aa27.03■■□□□ 1.92
DDR1-279ENST00000515529 SYNJ2BP-COX16A0A087WUM0 186 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 PALM2-AKAP2B1ALY0 433 aaPredicted RBP27.02■■□□□ 1.92
DDR1-279ENST00000515529 IRAK2O43187 625 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 HOXC11O43248 304 aaPredicted RBP27.02■■□□□ 1.92
DDR1-279ENST00000515529 SKILP12757 684 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 DRD1P21728 446 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 GALK1P51570 392 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 NUBP1P53384 320 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 PREPLQ4J6C6 727 aaPredicted RBP27.02■■□□□ 1.92
DDR1-279ENST00000515529 TMEM196Q5HYL7 178 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 XPO6Q96QU8 1125 aaKnown RBP27.02■■□□□ 1.92
DDR1-279ENST00000515529 COX16Q9P0S2 106 aa27.02■■□□□ 1.92
DDR1-279ENST00000515529 IGLV3-27P01718 113 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 SLC2A3P11169 496 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 EIF2DP41214 584 aaKnown RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 RPS9P46781 194 aaKnown RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 C1QBPQ07021 282 aaKnown RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 TSR1Q2NL82 804 aaKnown RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 ACAD10Q6JQN1 1059 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 ZNF571Q7Z3V5 609 aaPredicted RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 DTWD2Q8NBA8 298 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 CLDN23Q96B33 292 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 FCRL2Q96LA5 508 aaPredicted RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 PRRX2Q99811 253 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 DDX50Q9BQ39 737 aaKnown RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 METTL5Q9NRN9 209 aaKnown RBP27.01■■□□□ 1.91
DDR1-279ENST00000515529 SLC12A6Q9UHW9 1150 aa27.01■■□□□ 1.91
DDR1-279ENST00000515529 MIA3Q5JRA6 1907 aa27■■□□□ 1.91
DDR1-279ENST00000515529 TMCO5BA8MYB1 307 aa27■■□□□ 1.91
DDR1-279ENST00000515529 MOCS2O96007 188 aaPredicted RBP27■■□□□ 1.91
DDR1-279ENST00000515529 SERPING1P05155 500 aa27■■□□□ 1.91
DDR1-279ENST00000515529 CHRNB1P11230 501 aa27■■□□□ 1.91
DDR1-279ENST00000515529 TYRP14679 529 aa27■■□□□ 1.91
DDR1-279ENST00000515529 OPRD1P41143 372 aa27■■□□□ 1.91
DDR1-279ENST00000515529 SULT1E1P49888 294 aa27■■□□□ 1.91
DDR1-279ENST00000515529 NME3Q13232 169 aa27■■□□□ 1.91
DDR1-279ENST00000515529 ADGRF1Q5T601 910 aa27■■□□□ 1.91
DDR1-279ENST00000515529 SND1Q7KZF4 910 aaKnown RBP eCLIP27■■□□□ 1.91
DDR1-279ENST00000515529 PHLDB2Q86SQ0 1253 aa27■■□□□ 1.91
DDR1-279ENST00000515529 CPXM2Q8N436 756 aa27■■□□□ 1.91
DDR1-279ENST00000515529 NAT16Q8N8M0 369 aa27■■□□□ 1.91
DDR1-279ENST00000515529 BHMTQ93088 406 aa27■■□□□ 1.91
DDR1-279ENST00000515529 PNKPQ96T60 521 aa27■■□□□ 1.91
DDR1-279ENST00000515529 SYT11Q9BT88 431 aa27■■□□□ 1.91
DDR1-279ENST00000515529 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27■■□□□ 1.91
DDR1-279ENST00000515529 SELENOOQ9BVL4 669 aa27■■□□□ 1.91
DDR1-279ENST00000515529 ZNHIT6Q9NWK9 470 aaKnown RBP27■■□□□ 1.91
DDR1-279ENST00000515529 MARK1Q9P0L2 795 aa27■■□□□ 1.91
DDR1-279ENST00000515529 M0QYT0 321 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 ACSL4O60488 711 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 PITX1P78337 314 aaPredicted RBP26.99■■□□□ 1.91
DDR1-279ENST00000515529 ZC3H12AQ5D1E8 599 aaKnown RBP26.99■■□□□ 1.91
DDR1-279ENST00000515529 NAIF1Q69YI7 327 aaPredicted RBP26.99■■□□□ 1.91
DDR1-279ENST00000515529 FSTL4Q6MZW2 842 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 NUDT18Q6ZVK8 323 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 MON1BQ7L1V2 547 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 GAS2L3Q86XJ1 694 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 SYNPOQ8N3V7 929 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 ATP6V0D2Q8N8Y2 350 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 CCDC26Q8TAB7 109 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 AZIN2Q96A70 460 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 SLC39A13Q96H72 371 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 RBM12Q9NTZ6 932 aaKnown RBP26.99■■□□□ 1.91
DDR1-279ENST00000515529 TMEM51Q9NW97 253 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 SPATA6Q9NWH7 488 aaPredicted RBP26.99■■□□□ 1.91
DDR1-279ENST00000515529 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.99■■□□□ 1.91
DDR1-279ENST00000515529 DLGAP2Q9P1A6 1054 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 DEC1Q9P2X7 70 aa26.99■■□□□ 1.91
DDR1-279ENST00000515529 ANKRD62A6NC57 917 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 IGLV3-25P01717 112 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 APODP05090 189 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 ABCB4P21439 1286 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 CCR1P32246 355 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 SLC6A11P48066 632 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 KDSRQ06136 332 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 GAB4Q2WGN9 574 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 FBXO43Q4G163 708 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 DNAJC24Q6P3W2 148 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 FAM217AQ8IXS0 508 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 ZNF687Q8N1G0 1237 aa26.98■■□□□ 1.91
DDR1-279ENST00000515529 DDI1Q8WTU0 396 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms