RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 REXO1L1PQ8IX06 675 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 CCAR2Q8N163 923 aaKnown RBP21.84■■□□□ 1.09
LSM6-207ENST00000515311 ACSF2Q96CM8 615 aaPredicted RBP21.84■■□□□ 1.09
LSM6-207ENST00000515311 SLC39A13Q96H72 371 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 PHF7Q9BWX1 381 aaPredicted RBP21.84■■□□□ 1.09
LSM6-207ENST00000515311 PIGVQ9NUD9 493 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 THEGQ9P2T0 379 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 EPS15L1Q9UBC2 864 aa21.84■■□□□ 1.09
LSM6-207ENST00000515311 BUB1O43683 1085 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 BUB1BO60566 1050 aaPredicted RBP21.83■■□□□ 1.09
LSM6-207ENST00000515311 CCR1P32246 355 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 PCK1P35558 622 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 NAP1L1P55209 391 aaKnown RBP21.83■■□□□ 1.09
LSM6-207ENST00000515311 TFF2Q03403 129 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 MTA1Q13330 715 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 MESDQ14696 234 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 AAK1Q2M2I8 961 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 SH3PXD2AQ5TCZ1 1133 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 CELF5Q8N6W0 485 aaKnown RBP21.83■■□□□ 1.09
LSM6-207ENST00000515311 KIAA1958Q8N8K9 716 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 KIAA1524Q8TCG1 905 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 FCRL2Q96LA5 508 aaPredicted RBP21.83■■□□□ 1.09
LSM6-207ENST00000515311 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.83■■□□□ 1.09
LSM6-207ENST00000515311 SMPD4Q9NXE4 827 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 OBP2AQ9NY56 170 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 GUCA1BQ9UMX6 200 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 NR2E1Q9Y466 385 aa21.83■■□□□ 1.09
LSM6-207ENST00000515311 LRCH4O75427 683 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 SLC1A1P43005 524 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 ZXDBP98169 803 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 BRMS1LQ5PSV4 323 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 NUGGCQ68CJ6 796 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 UNC45BQ8IWX7 931 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 ARFGAP1Q8N6T3 406 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 TDRD5Q8NAT2 981 aaKnown RBP21.82■■□□□ 1.08
LSM6-207ENST00000515311 ADAMTS19Q8TE59 1207 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 E2F7Q96AV8 911 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 SMG9Q9H0W8 520 aaKnown RBP21.82■■□□□ 1.08
LSM6-207ENST00000515311 PRDM6Q9NQX0 595 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 GKN1Q9NS71 199 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 CCL26Q9Y258 94 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 ZKSCAN5Q9Y2L8 839 aa21.82■■□□□ 1.08
LSM6-207ENST00000515311 KIF26AQ9ULI4 1882 aaPredicted RBP21.81■■□□□ 1.08
LSM6-207ENST00000515311 SYNJ2BP-COX16A0A087WUM0 186 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 LEFTY2O00292 366 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 STC2O76061 302 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 FCARP24071 287 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 USP4Q13107 963 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 ZNF77Q15935 545 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 MTSS1LQ765P7 747 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 LRRC57Q8N9N7 239 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 SH3RF2Q8TEC5 729 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 DCLK3Q9C098 648 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 TRMT1Q9NXH9 659 aaKnown RBP21.81■■□□□ 1.08
LSM6-207ENST00000515311 COX16Q9P0S2 106 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 CFAP97Q9P2B7 532 aa21.81■■□□□ 1.08
LSM6-207ENST00000515311 E2F8A0AVK6 867 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 GRID2IPA4D2P6 1211 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 TMEM110-MUSTN1A8MSY1 372 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 KCNU1A8MYU2 1149 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 MOCS3O95396 460 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 LATS1O95835 1130 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 APOEP02649 317 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 HARS2P49590 506 aaKnown RBP21.8■■□□□ 1.08
LSM6-207ENST00000515311 KCNQ1P51787 676 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 ATXN1P54253 815 aaKnown RBP21.8■■□□□ 1.08
LSM6-207ENST00000515311 AIF1P55008 147 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 RAB6CQ53S08 254 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 ZC3H12AQ5D1E8 599 aaKnown RBP21.8■■□□□ 1.08
LSM6-207ENST00000515311 HTR3DQ70Z44 454 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 SLFN11Q7Z7L1 901 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 DAAM2Q86T65 1068 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 FAM131BQ86XD5 332 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 SYCE1Q8N0S2 351 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 RNF34Q969K3 372 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 AZIN2Q96A70 460 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 NTAN1Q96AB6 310 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 RAB6CQ9H0N0 254 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 WDCPQ9H6R7 721 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 ZFP14Q9HCL3 533 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 ARHGEF38Q9NXL2 777 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 LSM7Q9UK45 103 aaKnown RBP21.8■■□□□ 1.08
LSM6-207ENST00000515311 CAPN6Q9Y6Q1 641 aa21.8■■□□□ 1.08
LSM6-207ENST00000515311 USP27XA6NNY8 438 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 GREM1O60565 184 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 HMBSP08397 361 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 IRF1P10914 325 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 MIPP30301 263 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 CC2D1AQ6P1N0 951 aaPredicted RBP21.79■■□□□ 1.08
LSM6-207ENST00000515311 ZDHHC14Q8IZN3 488 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 PLCD3Q8N3E9 789 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 ELSPBP1Q96BH3 223 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 BTN2A3PQ96KV6 586 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 USP18Q9UMW8 372 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 ZNF510Q9Y2H8 683 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 ALG6Q9Y672 507 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 COL6A3P12111 3177 aa21.79■■□□□ 1.08
LSM6-207ENST00000515311 SPTBN5Q9NRC6 3674 aaKnown RBP21.79■■□□□ 1.08
LSM6-207ENST00000515311 C2CD4DB7Z1M9 353 aa21.78■■□□□ 1.08
LSM6-207ENST00000515311 ANHXE9PGG2 379 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms