RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FYB2Q5VWT5 728 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CATSPER4Q7RTX7 472 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CPNE8Q86YQ8 564 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CCDC60Q8IWA6 550 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 DDX1Q92499 740 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT35Q92764 455 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 GATA6Q92908 595 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CD101Q93033 1021 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 MFSD14AQ96MC6 490 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 XPO6Q96QU8 1125 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 NUDCD1Q96RS6 583 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 IFT22Q9H7X7 185 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CHORDC1Q9UHD1 332 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 PCDHB4Q9Y5E5 795 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 PCDHA10Q9Y5I2 948 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 DENND3A2RUS2 1198 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 A6NL46 340 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 GOLGA8RI6L899 631 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 FZD9O00144 591 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 ATMINO43313 823 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 SULT1B1O43704 296 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 GRIN3BO60391 1043 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 OCM2P0CE71 109 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 OCMP0CE72 109 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 FDX1P10109 184 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 POU2F1P14859 743 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 HSPA6P17066 643 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CDH3P22223 829 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CCND2P30279 289 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 PTENP60484 403 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 OLR1P78380 273 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 TAGLNQ01995 201 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 LPIN1Q14693 890 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 ANKRD39Q53RE8 183 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 BTBD8Q5XKL5 378 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM180BQ6P0A1 224 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 XRRA1Q6P2D8 792 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 EME1Q96AY2 570 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 OTUD5Q96G74 571 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 FAM84AQ96KN4 292 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CTRCQ99895 268 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 NEURL2Q9BR09 285 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 HEMGNQ9BXL5 484 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 DPH5Q9H2P9 285 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 GHITMQ9H3K2 345 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 ARMC7Q9H6L4 198 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CAAP1Q9H8G2 361 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 SP140LQ9H930 580 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 CYP39A1Q9NYL5 469 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 KCNN3Q9UGI6 736 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 VPS51Q9UID3 782 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 ALG6Q9Y672 507 aa7.72□□□□□ -1.17
PDLIM5-219ENST00000514743 LRRIQ4A6NIV6 560 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 LACTBL1A8MY62 500 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 CYP26A1O43174 497 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 DAPK3O43293 454 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 NPPAP01160 153 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 PABPC4LP0CB38 370 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 VHLP40337 213 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 NKX2-5P52952 324 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 OAZ1P54368 228 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 HMGCS2P54868 508 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 WNT7BP56706 349 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 MLLT1Q03111 559 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 ZNF211Q13398 564 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 KCNJ8Q15842 424 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 PPP6R3Q5H9R7 873 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 ZC3H12BQ5HYM0 836 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 SHEQ5VZ18 495 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 KRT39Q6A163 491 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 SLC44A2Q8IWA5 706 aaPredicted RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 TAS1R2Q8TE23 839 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 SEPT1Q8WYJ6 367 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 RAPGEF5Q92565 580 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 SGK3Q96BR1 496 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 ERLEC1Q96DZ1 483 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 ATP6V1G3Q96LB4 118 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 TRIM51Q9BSJ1 452 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 TXLNGYQ9BZA5 131 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 LRRC4CQ9HCJ2 640 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 TMEM8AQ9HCN3 771 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 ATP6V1HQ9UI12 483 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 CNOT7Q9UIV1 285 aaKnown RBP7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 STRIP2Q9ULQ0 834 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 CD2APQ9Y5K6 639 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 NFASCO94856 1347 aa7.71□□□□□ -1.17
PDLIM5-219ENST00000514743 F8W810 466 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 ATP2A1O14983 1001 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 MCF2LO15068 1137 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 UBOX5O94941 541 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 DNAJB1P25685 340 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 L1CAMP32004 1257 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 TRIM23P36406 574 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 SP2Q02086 613 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 RELQ04864 619 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 CYP24A1Q07973 514 aa7.71□□□□□ -1.18
PDLIM5-219ENST00000514743 DMP1Q13316 513 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms