RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SCUBE3Q8IX30 993 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 GOLGA1Q92805 767 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 GBP4Q96PP9 640 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 TUBGCP2Q9BSJ2 902 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 SLC4A5Q9BY07 1137 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 NDST4Q9H3R1 872 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 SIX2Q9NPC8 291 aa24.05■■□□□ 1.44
CLDND1-230ENST00000514537 MYO18AQ92614 2054 aaKnown RBP24.05■■□□□ 1.44
CLDND1-230ENST00000514537 GFRA2O00451 464 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 MSI1O43347 362 aaKnown RBP24.04■■□□□ 1.44
CLDND1-230ENST00000514537 THAP12O43422 761 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 RHOBTB1O94844 696 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 LATS1O95835 1130 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 FYNP06241 537 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 USP8P40818 1118 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 PUM1Q14671 1186 aaKnown RBP eCLIP24.04■■□□□ 1.44
CLDND1-230ENST00000514537 MIIPQ5JXC2 388 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 TMEM110Q86TL2 294 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 C11orf74Q86VG3 221 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 GPT2Q8TD30 523 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 ACOX2Q99424 681 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 ARRDC1-AS1Q9H2J1 176 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 ST7Q9NRC1 585 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 CYTH4Q9UIA0 394 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 INVSQ9Y283 1065 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 PCDHGA5Q9Y5G8 931 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.04■■□□□ 1.44
CLDND1-230ENST00000514537 DNAH14Q0VDD8 3507 aa24.04■■□□□ 1.44
CLDND1-230ENST00000514537 SART1O43290 800 aaKnown RBP24.03■■□□□ 1.44
CLDND1-230ENST00000514537 PRKCSHP14314 528 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-230ENST00000514537 ELF2Q15723 593 aa24.03■■□□□ 1.44
CLDND1-230ENST00000514537 HSP90AA4PQ58FG1 418 aa24.03■■□□□ 1.44
CLDND1-230ENST00000514537 PRR23CQ6ZRP0 262 aa24.03■■□□□ 1.44
CLDND1-230ENST00000514537 DDI1Q8WTU0 396 aa24.03■■□□□ 1.44
CLDND1-230ENST00000514537 PIWIL1Q96J94 861 aaKnown RBP24.03■■□□□ 1.44
CLDND1-230ENST00000514537 SAMSN1Q9NSI8 373 aaKnown RBP24.03■■□□□ 1.44
CLDND1-230ENST00000514537 DNAJC12Q9UKB3 198 aa24.03■■□□□ 1.44
CLDND1-230ENST00000514537 CLEC4EQ9ULY5 219 aa24.03■■□□□ 1.44
CLDND1-230ENST00000514537 A0A1W2PQF6 199 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 TCRBV21S2A2A0A5A6 115 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 FOXD2O60548 495 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-230ENST00000514537 IGLV3-27P01718 113 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 HOXB2P14652 356 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 SDHBP21912 280 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 WASP42768 502 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 ZNF445P59923 1031 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 MPPE1Q53F39 396 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 ADGRF1Q5T601 910 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 SDE2Q6IQ49 451 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 DPY19L2P1Q6NXN4 242 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 RBM43Q6ZSC3 357 aaKnown RBP24.02■■□□□ 1.44
CLDND1-230ENST00000514537 BEND5Q7L4P6 421 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 ERMP1Q7Z2K6 904 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 CHPFQ8IZ52 775 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 HMGB4Q8WW32 186 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 GABRG3Q99928 467 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 SLC2A11Q9BYW1 496 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 CD248Q9HCU0 757 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 BCCIPQ9P287 314 aaKnown RBP eCLIP24.02■■□□□ 1.44
CLDND1-230ENST00000514537 AJAP1Q9UKB5 411 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-230ENST00000514537 SPAG17Q6Q759 2223 aa24.02■■□□□ 1.44
CLDND1-230ENST00000514537 KCNJ18B7U540 433 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 PAPSS1O43252 624 aaPredicted RBP24.01■■□□□ 1.43
CLDND1-230ENST00000514537 NCAM1P13591 858 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 GBP1P32455 592 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 P2RY2P41231 377 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 RING1Q06587 406 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 KCNJ12Q14500 433 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 GEN1Q17RS7 908 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 UNC45BQ8IWX7 931 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 WDTC1Q8N5D0 677 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 NAALADL1Q9UQQ1 740 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 EML5Q05BV3 1969 aa24.01■■□□□ 1.43
CLDND1-230ENST00000514537 E5RJQ4 531 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 FOXN3O00409 490 aaPredicted RBP24■■□□□ 1.43
CLDND1-230ENST00000514537 ZNF806P0C7X5 589 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 BCKDHBP21953 392 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 TBX4P57082 545 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 PTK2Q05397 1052 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 KCNMA1Q12791 1236 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 PLA2G2CQ5R387 149 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 NUGGCQ68CJ6 796 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 PMS2CLQ68D20 193 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 ENOX1Q8TC92 643 aaKnown RBP24■■□□□ 1.43
CLDND1-230ENST00000514537 DQX1Q8TE96 717 aaKnown RBP24■■□□□ 1.43
CLDND1-230ENST00000514537 RLN3Q8WXF3 142 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 AZIN2Q96A70 460 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 FAM149B1Q96BN6 582 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 TMA16Q96EY4 203 aaKnown RBP24■■□□□ 1.43
CLDND1-230ENST00000514537 PCDHGC3Q9UN70 934 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 CACNA1AO00555 2505 aa24■■□□□ 1.43
CLDND1-230ENST00000514537 TSPAN3O60637 253 aa23.99■■□□□ 1.43
CLDND1-230ENST00000514537 GABRG2P18507 467 aa23.99■■□□□ 1.43
CLDND1-230ENST00000514537 EEF1GP26641 437 aaKnown RBP23.99■■□□□ 1.43
CLDND1-230ENST00000514537 HOXD9P28356 352 aaPredicted RBP23.99■■□□□ 1.43
CLDND1-230ENST00000514537 CLCN1P35523 988 aa23.99■■□□□ 1.43
CLDND1-230ENST00000514537 ATXN1P54253 815 aaKnown RBP23.99■■□□□ 1.43
CLDND1-230ENST00000514537 PDCLQ13371 301 aa23.99■■□□□ 1.43
CLDND1-230ENST00000514537 CCDC6Q16204 474 aa23.99■■□□□ 1.43
CLDND1-230ENST00000514537 MAP7D1Q3KQU3 841 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms