RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 HSFY1Q96LI6 401 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 MBD1Q9UIS9 605 aaPredicted RBP10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 STOML2Q9UJZ1 356 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 PLXND1Q9Y4D7 1925 aa10.93□□□□□ -0.66
HMGXB3-205ENST00000514469 DCDC2BA2VCK2 349 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 MSI1O43347 362 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 FBXO21O94952 628 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CAVIN2O95810 425 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 IGLV3-27P01718 113 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 LTFP02788 710 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CYBBP04839 570 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 NDUFV2P19404 249 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 WASP42768 502 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 GPD2P43304 727 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 RPL34P49207 117 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 HARS2P49590 506 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 ENPP2Q13822 863 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 BYSLQ13895 437 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 GEN1Q17RS7 908 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 KIAA1211LQ6NV74 962 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 TRIM65Q6PJ69 517 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 ENOSF1Q7L5Y1 443 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CYP2U1Q7Z449 544 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 ANKS1BQ7Z6G8 1248 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 IRF2BP1Q8IU81 584 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CHPFQ8IZ52 775 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 FRMD1Q8N878 549 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 IPO4Q8TEX9 1081 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CLEC4CQ8WTT0 213 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 PIWIL1Q96J94 861 aaKnown RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CLSTN2Q9H4D0 955 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CACNA2D2Q9NY47 1150 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 SFMBT1Q9UHJ3 866 aa10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 MUC22E2RYF6 1773 aaPredicted RBP10.92□□□□□ -0.66
HMGXB3-205ENST00000514469 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 PIK3R2O00459 728 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 NPC1O15118 1278 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 HOXD9P28356 352 aaPredicted RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 DHPSP49366 369 aaPredicted RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 ZNF445P59923 1031 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 EIF4HQ15056 248 aaKnown RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 MPPE1Q53F39 396 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 SPDYCQ5MJ68 293 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 PEAR1Q5VY43 1037 aaPredicted RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 RNF43Q68DV7 783 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 SDE2Q6IQ49 451 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 LPCAT2Q7L5N7 544 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 PGBD3Q8N328 593 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 MLKLQ8NB16 471 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 DDI1Q8WTU0 396 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 FAM81BQ96LP2 452 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 EDEM2Q9BV94 578 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 SLC2A11Q9BYW1 496 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 UBE2TQ9NPD8 197 aaPredicted RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 THAP10Q9P2Z0 257 aaPredicted RBP10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
HMGXB3-205ENST00000514469 ATG2BQ96BY7 2078 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 MYOFQ9NZM1 2061 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 IGHV1OR15-9A0A0B4J2B8 117 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 LNP1A1A4G5 178 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 GTPBP10A4D1E9 387 aaKnown RBP10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 BECN2A8MW95 431 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 TM4SF5O14894 197 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 MED7O43513 233 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 FYNP06241 537 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 KRT5P13647 590 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 GNA15P30679 374 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 IL12RB1P42701 662 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 PTGER3P43115 390 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 APBA1Q02410 837 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 RING1Q06587 406 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 NNTQ13423 1086 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 PPM1JQ5JR12 505 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 ADGRF1Q5T601 910 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 STPG1Q5TH74 334 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 NUGGCQ68CJ6 796 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 IL31Q6EBC2 164 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 SMYD5Q6GMV2 418 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 DENND1BQ6P3S1 775 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 GJB7Q6PEY0 223 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 TMEFF1Q8IYR6 380 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 STK32AQ8WU08 396 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 DDX1Q92499 740 aaKnown RBP10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 GOLGA1Q92805 767 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 MRGPRX1Q96LB2 322 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 CRACR2AQ9BSW2 395 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 MIS12Q9H081 205 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 APEX2Q9UBZ4 518 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 EVLQ9UI08 416 aaPredicted RBP10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 CYTH4Q9UIA0 394 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 STON1Q9Y6Q2 735 aa10.9□□□□□ -0.66
HMGXB3-205ENST00000514469 PATE3B3GLJ2 98 aa10.89□□□□□ -0.67
HMGXB3-205ENST00000514469 WASH3PC4AMC7 463 aa10.89□□□□□ -0.67
HMGXB3-205ENST00000514469 MAP3K13O43283 966 aa10.89□□□□□ -0.67
HMGXB3-205ENST00000514469 SART1O43290 800 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms