RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 KCNT1Q5JUK3 1230 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 FAM26FQ5R3K3 315 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 CLEC20AQ6ZU45 233 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 CRYBG2Q8N1P7 616 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 PIWIL1Q96J94 861 aaKnown RBP21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 TNMDQ9H2S6 317 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 TM9SF3Q9HD45 589 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 ASH1LQ9NR48 2969 aaKnown RBP21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 NAGPAQ9UK23 515 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 TMEM131Q92545 1883 aa21.36■■□□□ 1.01
SQSTM1-215ENST00000514093 CABIN1Q9Y6J0 2220 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 LRRIQ3A6PVS8 624 aaPredicted RBP21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 H0Y8X5 98 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 EXOC3O60645 756 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 C4BPAP04003 597 aaKnown RBP21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 GRK6P43250 576 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 TMEM215Q68D42 235 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 KLHDC10Q6PID8 442 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 ANKS1BQ7Z6G8 1248 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 SCD5Q86SK9 330 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 USP28Q96RU2 1077 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 KBTBD4Q9NVX7 518 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 RASAL2Q9UJF2 1139 aa21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.35■■□□□ 1.01
SQSTM1-215ENST00000514093 NUMA1Q14980 2115 aa21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 CORO1AP31146 461 aaKnown RBP21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 TEAD4Q15561 434 aa21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 SERPINA13PQ6UXR4 307 aa21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 ZNF366Q8N895 744 aa21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 RBBP8NLQ8NC74 664 aaPredicted RBP21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 OR2T3Q8NH03 318 aa21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 AGO1Q9UL18 857 aaKnown RBP21.34■■□□□ 1.01
SQSTM1-215ENST00000514093 CASP1P29466 404 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 CHKAP35790 457 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 CCT8P50990 548 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 EFEMP1Q12805 493 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 SLC39A14Q15043 492 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 E2F4Q16254 413 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 SPOPLQ6IQ16 392 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 PARD3BQ8TEW8 1205 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 IGSF8Q969P0 613 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 DHX58Q96C10 678 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 BIRC7Q96CA5 298 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 TWNKQ96RR1 684 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 LRRC27Q9C0I9 530 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 LHX5Q9H2C1 402 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 ZNF510Q9Y2H8 683 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 RAI2Q9Y5P3 530 aa21.33■■□□□ 1.01
SQSTM1-215ENST00000514093 FSBPO95073 299 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 KIF20AO95235 890 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 SNRPFP62306 86 aaKnown RBP21.32■■□□□ 1
SQSTM1-215ENST00000514093 DLG4P78352 724 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 ARID5AQ03989 594 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 PRAMEF14Q5SWL7 426 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 DENND1CQ8IV53 801 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 DDI1Q8WTU0 396 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 CYFIP2Q96F07 1278 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 HNRNPABQ99729 332 aaKnown RBP21.32■■□□□ 1
SQSTM1-215ENST00000514093 PCED1AQ9H1Q7 454 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 SLC39A2Q9NP94 309 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 FTSJ1Q9UET6 329 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 PCDHA5Q9Y5H7 936 aa21.32■■□□□ 1
SQSTM1-215ENST00000514093 CKAP5Q14008 2032 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 CBX4O00257 560 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 TLX3O43711 291 aaPredicted RBP21.31■■□□□ 1
SQSTM1-215ENST00000514093 PCDHGA12O60330 932 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 P4HA1P13674 534 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 GRIA4P48058 902 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 KIF11P52732 1056 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 SEMG2Q02383 582 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 SGSM1Q2NKQ1 1148 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 UNC93AQ86WB7 457 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 TMPRSS12Q86WS5 348 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 GATAD2AQ86YP4 633 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 ENGASEQ8NFI3 743 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 CYB5D2Q8WUJ1 264 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 PRORYQ9H606 182 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 KALRNO60229 2985 aa21.31■■□□□ 1
SQSTM1-215ENST00000514093 ATXN7O15265 892 aaPredicted RBP21.3■■□□□ 1
SQSTM1-215ENST00000514093 SEMA4FO95754 770 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 CYBBP04839 570 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 RALAP11233 206 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 JUPP14923 745 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 EIF2S3P41091 472 aaKnown RBP21.3■■□□□ 1
SQSTM1-215ENST00000514093 CTSKP43235 329 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 ASPAP45381 313 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 AP3M2P53677 418 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 COG7P83436 770 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 AMPD3Q01432 767 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 CAMK2GQ13555 558 aaPredicted RBP21.3■■□□□ 1
SQSTM1-215ENST00000514093 EIF4HQ15056 248 aaKnown RBP21.3■■□□□ 1
SQSTM1-215ENST00000514093 ADAT2Q7Z6V5 191 aaKnown RBP21.3■■□□□ 1
SQSTM1-215ENST00000514093 TADA2BQ86TJ2 420 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 DCLK3Q9C098 648 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 BLZF1Q9H2G9 400 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 OSGEPQ9NPF4 335 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 TFIP11Q9UBB9 837 aaKnown RBP21.3■■□□□ 1
SQSTM1-215ENST00000514093 AK5Q9Y6K8 562 aa21.3■■□□□ 1
SQSTM1-215ENST00000514093 UBE4BO95155 1302 aa21.29■■□□□ 1
SQSTM1-215ENST00000514093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms