RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ETNK2Q9NVF9 386 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 DTLQ9NZJ0 730 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 FBXW11Q9UKB1 542 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 PRG3Q9Y2Y8 225 aaPredicted RBP15.49■□□□□ 0.07
VCAN-211ENST00000513984 PCDHB7Q9Y5E2 793 aa15.49■□□□□ 0.07
VCAN-211ENST00000513984 A0A087WUV0 522 aaPredicted RBP15.48■□□□□ 0.07
VCAN-211ENST00000513984 TCRBV7S3A2A0A539 114 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 TNFRSF10BO14763 440 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 CHADO15335 359 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 GAD2Q05329 585 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
VCAN-211ENST00000513984 CBLBQ13191 982 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 SEMA3BQ13214 749 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 DPYSQ14117 519 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 MTFR1Q15390 333 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 BSPRYQ5W0U4 402 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 BZW1Q7L1Q6 419 aaKnown RBP15.48■□□□□ 0.07
VCAN-211ENST00000513984 ZBED8Q8IZ13 594 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 DCP1BQ8IZD4 617 aaKnown RBP15.48■□□□□ 0.07
VCAN-211ENST00000513984 CRIPAKQ8N1N5 446 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 CNOT10Q9H9A5 744 aaKnown RBP15.48■□□□□ 0.07
VCAN-211ENST00000513984 DDIT4Q9NX09 232 aa15.48■□□□□ 0.07
VCAN-211ENST00000513984 NUP205Q92621 2012 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 HACD1B0YJ81 288 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 GOLGA8MH3BSY2 632 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 DGKIO75912 1065 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 MAP3K6O95382 1288 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 MAGEA6P43360 314 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 CXCR3P49682 368 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 IFI35P80217 286 aaPredicted RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 GUCY1A3Q02108 690 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 SKIDA1Q1XH10 827 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 SLC39A12Q504Y0 691 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 KCNT2Q6UVM3 1135 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 LRRC31Q6UY01 552 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 ADAM32Q8TC27 787 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 FUBP3Q96I24 572 aaKnown RBP eCLIP15.47■□□□□ 0.07
VCAN-211ENST00000513984 CCDC77Q9BR77 488 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 COLEC11Q9BWP8 271 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 LGALS13Q9UHV8 139 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 XPO7Q9UIA9 1087 aaKnown RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 ADAM28Q9UKQ2 775 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 SHROOM3Q8TF72 1996 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 ERICH4A6NGS2 130 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 SRRM3A6NNA2 597 aaPredicted RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 I6L893 689 aaPredicted RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 EEF2KO00418 725 aaKnown RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 MFSD11O43934 449 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 TADA2AO75478 443 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 GCATO75600 419 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 OR4Q2P0C623 313 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 MMP13P45452 471 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 HCAR3P49019 387 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 SLC5A3P53794 718 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 PAFAH1B3Q15102 231 aaKnown RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 TCTN1Q2MV58 587 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 FNBP1LQ5T0N5 605 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 TTC19Q6DKK2 380 aaPredicted RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 RFX8Q6ZV50 586 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 SCAMP5Q8TAC9 235 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 EDEM1Q92611 657 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 ANLNQ9NQW6 1124 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 EURLQ9NYK6 297 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.47■□□□□ 0.07
VCAN-211ENST00000513984 ZMYND8Q9ULU4 1186 aaPredicted RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 MFHAS1Q9Y4C4 1052 aa15.47■□□□□ 0.07
VCAN-211ENST00000513984 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.47■□□□□ 0.07
VCAN-211ENST00000513984 DCLK1O15075 740 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 HOXA2O43364 376 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 CREB3O43889 395 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 PQBP1O60828 265 aaKnown RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 CDH16O75309 829 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 IGLV3-25P01717 112 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 CXCL10P02778 98 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 CCL5P13501 91 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 ATP5DP30049 168 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 LSP1P33241 339 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 GRIK1P39086 918 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 ZNF135P52742 658 aaPredicted RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 MRPL58Q14197 206 aaKnown RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 NFE2Q16621 373 aaPredicted RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 ARL13BQ3SXY8 428 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 MSS51Q4VC12 460 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 VARS2Q5ST30 1063 aaKnown RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 PPP1R21Q6ZMI0 780 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 ANKRD33Q7Z3H0 272 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 TAC4Q86UU9 113 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 CCDC13Q8IYE1 715 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 PDIK1LQ8N165 341 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 RIBC1Q8N443 379 aaPredicted RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 TAB3Q8N5C8 712 aaPredicted RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 FRMD8Q9BZ67 464 aaPredicted RBP15.46■□□□□ 0.07
VCAN-211ENST00000513984 KLC2Q9H0B6 622 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 RAB6BQ9NRW1 208 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
VCAN-211ENST00000513984 C5orf60A6NFR6 353 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 E7EVH7 732 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 AMHP03971 560 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms