RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 GPD1P21695 349 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 WEE1P30291 646 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 NOS2P35228 1153 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 MATKP42679 507 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 IFNAR2P48551 515 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GALCP54803 685 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GSCP56915 257 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 TBX4P57082 545 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 CDK17Q00537 523 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 ZNF252P-AS1Q0IIN9 211 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 FCHO2Q0JRZ9 810 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 TRIP4Q15650 581 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 ZC3H12AQ5D1E8 599 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 DAB2IPQ5VWQ8 1189 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 NAIF1Q69YI7 327 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 CC2D1AQ6P1N0 951 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 KLHDC10Q6PID8 442 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 DENND1CQ8IV53 801 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 ACRBPQ8NEB7 543 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 DEPDC1BQ8WUY9 529 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 BHMTQ93088 406 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 BTBD6Q96KE9 485 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 FCRL2Q96LA5 508 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 SERPINB11Q96P15 392 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 CDK5RAP1Q96SZ6 601 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 NPY6RQ99463 290 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 DESI2Q9BSY9 194 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 LINC00597Q9H2U6 94 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 HPS4Q9NQG7 708 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 TMPRSS4Q9NRS4 437 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 PIGVQ9NUD9 493 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 DUS2Q9NX74 493 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GTSE1Q9NYZ3 720 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 WDR35Q9P2L0 1181 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 IMPACTQ9P2X3 320 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 LSM7Q9UK45 103 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 SNX10Q9Y5X0 201 aa10.21□□□□□ -0.77
TOPBP1-209ENST00000513818 GOLGA6L7A0A1B0GV03 622 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 OTOL1A6NHN0 477 aaPredicted RBP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 C2CD4BA6NLJ0 364 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 GOLGA6L6A8MZA4 724 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 ARNTLO00327 626 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 SRFP11831 508 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 PDGFRAP16234 1089 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 FECHP22830 423 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 SCNN1AP37088 669 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 MAMLD1Q13495 774 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 EML3Q32P44 896 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 CCDC14Q49A88 953 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 PLEKHA7Q6IQ23 1121 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 DCUN1D2Q6PH85 259 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 Q6ZNB5 142 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 FAM131BQ86XD5 332 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 DDX42Q86XP3 938 aaKnown RBP eCLIP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 CPNE8Q86YQ8 564 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 OSCP1Q8WVF1 389 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 PLD4Q96BZ4 506 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 P2RY11Q96G91 374 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 BAG1Q99933 345 aaPredicted RBP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 DDX23Q9BUQ8 820 aaKnown RBP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 TRIM62Q9BVG3 475 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 ANLNQ9NQW6 1124 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 HEBP1Q9NRV9 189 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 OBP2AQ9NY56 170 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 AGO1Q9UL18 857 aaKnown RBP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 REXO2Q9Y3B8 237 aaKnown RBP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 HBS1LQ9Y450 684 aaKnown RBP10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 BDP1A6H8Y1 2624 aa10.2□□□□□ -0.78
TOPBP1-209ENST00000513818 TTC28Q96AY4 2481 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 A0A0U1RQJ8 604 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 SIGLEC16A6NMB1 481 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 I6L893 689 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 CHADO15335 359 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 TSPAN3O60637 253 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 IGLV3-27P01718 113 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 CYP17A1P05093 508 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 H2AFZP0C0S5 128 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 TCF3P15923 654 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 SDC4P31431 198 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 CYLC1P35663 651 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 SGSHP51688 502 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 COG7P83436 770 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 DEUP1Q05D60 604 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 ARHGAP29Q52LW3 1261 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 NADSYN1Q6IA69 706 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 PPP1R2P3Q6NXS1 205 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 TPGS1Q6ZTW0 290 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 H2AFVQ71UI9 128 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 BEND5Q7L4P6 421 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 ZNF276Q8N554 614 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 FAM172AQ8WUF8 416 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 ATRIPQ8WXE1 791 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 RNF34Q969K3 372 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 NXPE3Q969Y0 559 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 E2F7Q96AV8 911 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 MYEOVQ96EZ4 313 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 TRIM11Q96F44 468 aa10.19□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC39A13Q96H72 371 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms