RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ZNF560Q96MR9 790 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 NAT9Q9BTE0 207 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 EIF2AQ9BY44 585 aaKnown RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 KLHL25Q9H0H3 589 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TRPC7Q9HCX4 862 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ETNK2Q9NVF9 386 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 NSMCE4AQ9NXX6 385 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PIN4Q9Y237 131 aaKnown RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ABLIM1O14639 778 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 RARBP10826 455 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 NUP107P57740 925 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 FNBP1LQ5T0N5 605 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TTC7BQ86TV6 843 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 MAB21L3Q8N8X9 362 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 RMDN1Q96DB5 314 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PHF21BQ96EK2 531 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SPON2Q9BUD6 331 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 RUBCNLQ9H714 662 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 XPNPEP3Q9NQH7 507 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 GGA3Q9NZ52 723 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 VANGL2Q9ULK5 521 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 RPL5P46777 297 aaKnown RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ACSBG2Q5FVE4 666 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ZNF280CQ8ND82 737 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 APBB2Q92870 758 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SEPT3Q9UH03 358 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TSPAN16Q9UKR8 245 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TRDMT1O14717 391 aaKnown RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PEX11AO75192 247 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ASMTLO95671 621 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 APOA1P02647 267 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 SERPINA6P08185 405 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 COX4I1P13073 169 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 OTUD3Q5T2D3 398 aaPredicted RBP7.97□□□□□ -1.13
CLCN3-209ENST00000513761 LRRC8BQ6P9F7 803 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 MPZL3Q6UWV2 235 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 TAS2R42Q7RTR8 314 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 PTPRHQ9HD43 1115 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ACOT9Q9Y305 439 aa7.97□□□□□ -1.13
CLCN3-209ENST00000513761 ATP8B3O60423 1300 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 CAPN8A6NHC0 703 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 M0R2N6 131 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 UBDO15205 165 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 H2AFYO75367 372 aaKnown RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 SERPINB1P30740 379 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 LBRQ14739 615 aaKnown RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 SLC35G1Q2M3R5 365 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 BTBD8Q5XKL5 378 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 TNS4Q8IZW8 715 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 SHCBP1Q8NEM2 672 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 CPB2Q96IY4 423 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 L3MBTL3Q96JM7 780 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 MTFR1LQ9H019 292 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 WDR41Q9HAD4 459 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 PNPOQ9NVS9 261 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 NCKIPSDQ9NZQ3 722 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 AFF4Q9UHB7 1163 aaKnown RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 LGALS13Q9UHV8 139 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 UMODL1Q5DID0 1318 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 F8W8V4 182 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 CYB561D2O14569 222 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 PIGNO95427 931 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 LIN52Q52LA3 116 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 ZFP1Q6P2D0 407 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 RNF217Q8TC41 542 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 LENG1Q96BZ8 264 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 SEPHS2Q99611 448 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 C17orf80Q9BSJ5 609 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 PRMT7Q9NVM4 692 aaPredicted RBP7.96□□□□□ -1.13
CLCN3-209ENST00000513761 DDIT4Q9NX09 232 aa7.96□□□□□ -1.13
CLCN3-209ENST00000513761 E5RJQ4 531 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 AP3B1O00203 1094 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 PHGDHO43175 533 aaKnown RBP7.96□□□□□ -1.14
CLCN3-209ENST00000513761 KRT8P05787 483 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 STAG3L1P0CL83 205 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 CHRNB2P17787 502 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 EIF4BP23588 611 aaKnown RBP7.96□□□□□ -1.14
CLCN3-209ENST00000513761 CLK1P49759 484 aaKnown RBP7.96□□□□□ -1.14
CLCN3-209ENST00000513761 PLK1P53350 603 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 ANKRD22Q5VYY1 191 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 PATL1Q86TB9 770 aaKnown RBP7.96□□□□□ -1.14
CLCN3-209ENST00000513761 HPS6Q86YV9 775 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 MICU2Q8IYU8 434 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 OR5B17Q8NGF7 314 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 IL31RAQ8NI17 732 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 HTR3CQ8WXA8 447 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 MBOAT7Q96N66 472 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 SMIM31A0A1B0GVY4 71 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 JCHAINP01591 159 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 NDST1P52848 882 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 USP4Q13107 963 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 PRKAA1Q13131 559 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 CCDC153Q494R4 210 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 AASDHQ4L235 1098 aaPredicted RBP7.96□□□□□ -1.14
CLCN3-209ENST00000513761 XRRA1Q6P2D8 792 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 FAM162AQ96A26 154 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 OTUD5Q96G74 571 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 MMP19Q99542 508 aa7.96□□□□□ -1.14
CLCN3-209ENST00000513761 ASPSCR1Q9BZE9 553 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms