RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 GMIPQ9P107 970 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CFAP97Q9P2B7 532 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 EBF1Q9UH73 591 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 CHORDC1Q9UHD1 332 aaPredicted RBP10.37□□□□□ -0.75
CCL28-203ENST00000513525 USP18Q9UMW8 372 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 SIK3Q9Y2K2 1263 aa10.37□□□□□ -0.75
CCL28-203ENST00000513525 HHLA1C9JL84 531 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 K7EQS6 105 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 SLC16A3O15427 465 aaKnown RBP10.36□□□□□ -0.75
CCL28-203ENST00000513525 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
CCL28-203ENST00000513525 RPP40O75818 363 aaKnown RBP10.36□□□□□ -0.75
CCL28-203ENST00000513525 ADH1CP00326 375 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 HNRNPH3P31942 346 aaKnown RBP10.36□□□□□ -0.75
CCL28-203ENST00000513525 MXI1P50539 228 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 DMC1Q14565 340 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 CSRP2Q16527 193 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 RHBDF2Q6PJF5 856 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 DGLUCYQ7Z3D6 616 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 TRIM59Q8IWR1 403 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 TTC39CQ8N584 583 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 FAM160A2Q8N612 972 aaPredicted RBP10.36□□□□□ -0.75
CCL28-203ENST00000513525 FBXL13Q8NEE6 735 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 USP33Q8TEY7 942 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 CYFIP2Q96F07 1278 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 DNAI2Q9GZS0 605 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 L2HGDHQ9H9P8 463 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 CYLDQ9NQC7 956 aa10.36□□□□□ -0.75
CCL28-203ENST00000513525 SPTBN2O15020 2390 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 CKAP5Q14008 2032 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 A0A0A0MRY4 1105 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 RNF225M0QZC1 329 aaPredicted RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 AXIN1O15169 862 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 TLR5O60602 858 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 APBB3O95704 486 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 EPB41P11171 864 aaKnown RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 ADH5P11766 374 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 ADORA2BP29275 332 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 PXNP49023 591 aaPredicted RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 MRPS21P82921 87 aaKnown RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 HSF5Q4G112 596 aaPredicted RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 SYT10Q6XYQ8 523 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 CACNA2D4Q7Z3S7 1137 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 CCDC170Q8IYT3 715 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 ZNF276Q8N554 614 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 ZC3H10Q96K80 434 aaKnown RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 HHIPQ96QV1 700 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 PNKPQ96T60 521 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 MMRN2Q9H8L6 949 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 METTL14Q9HCE5 456 aaKnown RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 SEMA4GQ9NTN9 838 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 RAB20Q9NX57 234 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 MMP17Q9ULZ9 603 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 SCML2Q9UQR0 700 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 SH3BP1Q9Y3L3 701 aa10.35□□□□□ -0.75
CCL28-203ENST00000513525 CNOT1A5YKK6 2376 aaKnown RBP10.35□□□□□ -0.75
CCL28-203ENST00000513525 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 HOXC11O43248 304 aaPredicted RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 EPN2O95208 641 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 CYLC1P35663 651 aaPredicted RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 PGFP49763 221 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 GAD2Q05329 585 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 LY6G5CQ5SRR4 150 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 PPP1R26Q5T8A7 1209 aaPredicted RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 KLHDC10Q6PID8 442 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 PRR23CQ6ZRP0 262 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 ZNF662Q6ZS27 426 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 HTR3DQ70Z44 454 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 GPRIN1Q7Z2K8 1008 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 RASSF3Q86WH2 238 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 NETO1Q8TDF5 533 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 SEMA4DQ92854 862 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 EEF2KMTQ96G04 330 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 RTKNQ9BST9 563 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 DESI2Q9BSY9 194 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 DUSP16Q9BY84 665 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCL28-203ENST00000513525 SPHK2Q9NRA0 654 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 MYO1AQ9UBC5 1043 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 CDV3Q9UKY7 258 aaKnown RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 COQ4Q9Y3A0 265 aa10.34□□□□□ -0.75
CCL28-203ENST00000513525 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
CCL28-203ENST00000513525 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 EPN1Q9Y6I3 576 aaPredicted RBP10.34□□□□□ -0.75
CCL28-203ENST00000513525 SCAMP3O14828 347 aaKnown RBP10.33□□□□□ -0.76
CCL28-203ENST00000513525 KIF5CO60282 957 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 GDF9O60383 454 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 GREM1O60565 184 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 KAT7O95251 611 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 NDUFA10O95299 355 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 APODP05090 189 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 CD58P19256 250 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 ACO1P21399 889 aaKnown RBP10.33□□□□□ -0.76
CCL28-203ENST00000513525 ATP5C1P36542 298 aaKnown RBP10.33□□□□□ -0.76
CCL28-203ENST00000513525 GRIA2P42262 883 aa10.33□□□□□ -0.76
CCL28-203ENST00000513525 KIF11P52732 1056 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms