RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	BSPRY	Q5W0U4	402 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	DENND1C	Q8IV53	801 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TMEFF1	Q8IYR6	380 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	PGBD3	Q8N328	593 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CEP76	Q8TAP6	659 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	PIGK	Q92643	395 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CNTNAP3B	Q96NU0	1288 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CNTNAP3	Q9BZ76	1288 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	IRX2	Q9BZI1	471 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ULBP1	Q9BZM6	244 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	LRRC4	Q9HBW1	653 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TMEM9B	Q9NQ34	198 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CNGB3	Q9NQW8	809 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ABCC13	Q9NSE7	274 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TMEM74B	Q9NUR3	256 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RASAL2	Q9UJF2	1139 aa		13.14	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CACNA1E	Q15878	2313 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	SLC12A8	A0AV02	714 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	BICDL2	A1A5D9	508 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	YJEFN3	A6XGL0	299 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098		E7ENQ6	273 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	LATS1	O95835	1130 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	GNA14	O95837	355 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CSRP1	P21291	193 aa	Known RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	PML	P29590	882 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RPL34	P49207	117 aa	Known RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	GCNT1	Q02742	428 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CETN1	Q12798	172 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	KIAA1211L	Q6NV74	962 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RSRC2	Q7L4I2	434 aa	Known RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	IRGQ	Q8WZA9	623 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TFAP2B	Q92481	460 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	MRGPRX1	Q96LB2	322 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	IPO9	Q96P70	1041 aa	Known RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	PLK2	Q9NYY3	685 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CALCOCO1	Q9P1Z2	691 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CNTN6	Q9UQ52	1028 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CEP192	Q8TEP8	1941 aa		13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	MAP1B	P46821	2468 aa	Known RBP	13.13	□□□□□ -0.31
UBE2D3-231	ENST00000513098	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	UPK3BL1	B0FP48	263 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	PATE3	B3GLJ2	98 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	UPK3BL2	E5RIL1	263 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RNF225	M0QZC1	329 aa	Predicted RBP	13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	GABBR2	O75899	941 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CYBB	P04839	570 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CEACAM1	P13688	526 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CD19	P15391	556 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	NDUFV2	P19404	249 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	HARS2	P49590	506 aa	Known RBP	13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	DAOA	P59103	153 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	EIF4H	Q15056	248 aa	Known RBP	13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	GEN1	Q17RS7	908 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TRIM61	Q5EBN2	209 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ADGRF1	Q5T601	910 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	LYSMD4	Q5XG99	296 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	SMYD5	Q6GMV2	418 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	PMF1	Q6P1K2	205 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	MSANTD2	Q6P1R3	559 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TMEM270	Q6UE05	265 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RABEPK	Q7Z6M1	372 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	FMNL3	Q8IVF7	1028 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	TRIM59	Q8IWR1	403 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	EHBP1	Q8NDI1	1231 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	UBA3	Q8TBC4	463 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	NDRG1	Q92597	394 aa	Known RBP	13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	AZIN2	Q96A70	460 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	HSFY1	Q96LI6	401 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	NT5C1B	Q96P26	610 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ZSWIM1	Q9BR11	485 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	NUSAP1	Q9BXS6	441 aa	Known RBP	13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ELOVL2	Q9NXB9	296 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	NFE2L3	Q9Y4A8	694 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	STON1	Q9Y6Q2	735 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ASPM	Q8IZT6	3477 aa		13.12	□□□□□ -0.31
UBE2D3-231	ENST00000513098	WASH3P	C4AMC7	463 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	HMBS	P08397	361 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	SERPINF2	P08697	491 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ITPKA	P23677	461 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	WAS	P42768	502 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RPL6	Q02878	288 aa	Known RBP	13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ZNF33A	Q06730	810 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ADIG	Q0VDE8	80 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	LRMP	Q12912	555 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	DUOXA1	Q1HG43	343 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	CCDC40	Q4G0X9	1142 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	MPPE1	Q53F39	396 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	MPP7	Q5T2T1	576 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ISM2	Q6H9L7	571 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	ANKS1B	Q7Z6G8	1248 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	SIX6OS1	Q8N1H7	587 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	RNF139	Q8WU17	664 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	UCMA	Q8WVF2	138 aa		13.11	□□□□□ -0.31
UBE2D3-231	ENST00000513098	NELFB	Q8WX92	580 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms