RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ORC1Q13415 861 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 PLEKHG6Q3KR16 790 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 RAB41Q5JT25 222 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 PPP1R26Q5T8A7 1209 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-216ENST00000512683 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 ANKS1BQ7Z6G8 1248 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 GLRX5Q86SX6 157 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 FAM217AQ8IXS0 508 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 ENGASEQ8NFI3 743 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 SIPA1Q96FS4 1042 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 TMEM176AQ96HP8 235 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 PIWIL1Q96J94 861 aaKnown RBP13.18□□□□□ -0.3
VEGFA-216ENST00000512683 GTPBP4Q9BZE4 634 aaKnown RBP13.18□□□□□ -0.3
VEGFA-216ENST00000512683 FBRSQ9HAH7 460 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 OLA1Q9NTK5 396 aaKnown RBP13.18□□□□□ -0.3
VEGFA-216ENST00000512683 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 PCDHB9Q9Y5E1 797 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 GON4LQ3T8J9 2241 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 SPAARA0A1B0GVQ0 90 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 METTL12A8MUP2 240 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 HYAL3O43820 417 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 LATS1O95835 1130 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 CORO1AP31146 461 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 ZBTB16Q05516 673 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 PNOCQ13519 176 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 BECN1Q14457 450 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 TRIP4Q15650 581 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 TRIP6Q15654 476 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 FUT11Q495W5 492 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 KIAA1324Q6UXG2 1013 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 RSRC2Q7L4I2 434 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 RAB44Q7Z6P3 723 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 TMPRSS6Q8IU80 811 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 SMYD4Q8IYR2 804 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 ZNF557Q8N988 423 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 FBXL13Q8NEE6 735 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 ADAMTS14Q8WXS8 1223 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 PRCCQ92733 491 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 PLD4Q96BZ4 506 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 TOE1Q96GM8 510 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 MARCH2Q9P0N8 246 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 STOML2Q9UJZ1 356 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 AGO1Q9UL18 857 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 APOBEC2Q9Y235 224 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 HBS1LQ9Y450 684 aaKnown RBP13.17□□□□□ -0.3
VEGFA-216ENST00000512683 PCDHGB2Q9Y5G2 931 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 CACNA1GO43497 2377 aa13.17□□□□□ -0.3
VEGFA-216ENST00000512683 ATXN2Q99700 1313 aaKnown RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 WASH3PC4AMC7 463 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 CETN3O15182 167 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 TOP3BO95985 862 aaKnown RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 ZBED1O96006 694 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 TRIM49P0CI25 452 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 TRIM49CP0CI26 452 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 ACADMP11310 421 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 NCAM1P13591 858 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 CD58P19256 250 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 SPINK2P20155 84 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 YWHAEP62258 255 aaKnown RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 NUCB2P80303 420 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 EFEMP1Q12805 493 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 SUZ12Q15022 739 aaKnown RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 MPPE1Q53F39 396 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 DBX2Q6ZNG2 339 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 SCML4Q8N228 414 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 DEFB119Q8N690 84 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 WFIKKN2Q8TEU8 576 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 ZCCHC14Q8WYQ9 949 aaKnown RBP13.16□□□□□ -0.3
VEGFA-216ENST00000512683 PLK2Q9NYY3 685 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 PLA2G4CQ9UP65 541 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 RAD54BQ9Y620 910 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 IGF2RP11717 2491 aa13.16□□□□□ -0.3
VEGFA-216ENST00000512683 PCNX2A6NKB5 2137 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 MDM4O15151 490 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 BCAT2O15382 392 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-216ENST00000512683 SH3BP5O60239 455 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 IL12RB1P42701 662 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 PRCPP42785 496 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 TPMTP51580 245 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 RAD23BP54727 409 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 YWHAGP61981 247 aaKnown RBP eCLIP13.15□□□□□ -0.3
VEGFA-216ENST00000512683 ARID5AQ03989 594 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 GEN1Q17RS7 908 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 MPP7Q5T2T1 576 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 PIGZQ86VD9 579 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 SLC4A11Q8NBS3 891 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-216ENST00000512683 SPATA20Q8TB22 786 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 DDI1Q8WTU0 396 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 JAKMIP2Q96AA8 810 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 EEF2KMTQ96G04 330 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 CDC6Q99741 560 aa13.15□□□□□ -0.3
VEGFA-216ENST00000512683 MKRN2Q9H000 416 aaKnown RBP13.15□□□□□ -0.3
VEGFA-216ENST00000512683 RASAL2Q9UJF2 1139 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms