RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 KCTD16Q68DU8 428 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 LCLAT1Q6UWP7 414 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 SLC24A5Q71RS6 500 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 ADGRD2Q7Z7M1 963 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 CCDC25Q86WR0 208 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 VSIG1Q86XK7 387 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 KCTD6Q8NC69 237 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 PRSS33Q8NF86 280 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 C1orf54Q8WWF1 131 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 RSAD2Q8WXG1 361 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 RSPH1Q8WYR4 309 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 ARL8AQ96BM9 186 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 CENPTQ96BT3 561 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 MYO19Q96H55 970 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 CPB2Q96IY4 423 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 TNIP3Q96KP6 325 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 SLITRK1Q96PX8 696 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 TBCBQ99426 244 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 PRKD2Q9BZL6 878 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 FAM49AQ9H0Q0 323 aaPredicted RBP9.89□□□□□ -0.83
MSH3-203ENST00000512531 TLR9Q9NR96 1032 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 SLC38A7Q9NVC3 462 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 CHORDC1Q9UHD1 332 aaPredicted RBP9.89□□□□□ -0.83
MSH3-203ENST00000512531 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.89□□□□□ -0.83
MSH3-203ENST00000512531 C5orf42Q9H799 3197 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
MSH3-203ENST00000512531 CFAP69A5D8W1 941 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 GOLGA8SH3BPF8 625 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 RIPK2O43353 540 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 NPTXRO95502 500 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 ZFXP17010 805 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 LAG3P18627 525 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 GBP2P32456 591 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 CRYBB1P53674 252 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 KLF1Q13351 362 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 PDCLQ13371 301 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 PDK2Q15119 407 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 SIX1Q15475 284 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 SLC10A6Q3KNW5 377 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 FAM102AQ5T9C2 384 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 CENPUQ71F23 418 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 BZW1Q7L1Q6 419 aaKnown RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 CYP2U1Q7Z449 544 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 RELL1Q8IUW5 271 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 ETFBKMTQ8IXQ9 262 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 CCDC116Q8IYX3 515 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 KIAA0319LQ8IZA0 1049 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 ANKS4BQ8N8V4 417 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 PIK3R5Q8WYR1 880 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 CNPY3Q9BT09 278 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 FRMD8Q9BZ67 464 aaPredicted RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 TXLNGYQ9BZA5 131 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 SNX25Q9H3E2 840 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 MINDY3Q9H8M7 445 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 PCDH9Q9HC56 1237 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 NGRNQ9NPE2 291 aaKnown RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 TMEM161AQ9NX61 479 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 TPX2Q9ULW0 747 aaKnown RBP9.88□□□□□ -0.83
MSH3-203ENST00000512531 POLIQ9UNA4 740 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 SHOC2Q9UQ13 582 aa9.88□□□□□ -0.83
MSH3-203ENST00000512531 ATXN2Q99700 1313 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 CITO14578 2027 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 A0A087WUV0 522 aaPredicted RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 SGK1O00141 431 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 LIASO43766 372 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 HUS1O60921 280 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 FGF18O76093 207 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 ADH1CP00326 375 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 ABHD2P08910 425 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 DARSP14868 501 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 SDC4P31431 198 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 STIP1P31948 543 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 PPM1AP35813 382 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 MAPK8P45983 427 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 RPIAP49247 311 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 ZNF143P52747 638 aaPredicted RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 ITGA8P53708 1063 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 VCPP55072 806 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 HNRNPH2P55795 449 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 PSMA6P60900 246 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 MAGOHP61326 146 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 TCF15Q12870 199 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 KRT81Q14533 505 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 UAP1Q16222 522 aaPredicted RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 PAN2Q504Q3 1202 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 IZUMO3Q5VZ72 239 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 KAZNQ674X7 775 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 OR6B2Q6IFH4 312 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 AADACL2Q6P093 401 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 DENND1BQ6P3S1 775 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 TTC27Q6P3X3 843 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 ZDHHC24Q6UX98 284 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 DPH6Q7L8W6 267 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 PHLDB2Q86SQ0 1253 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 XYLT1Q86Y38 959 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 RFX6Q8HWS3 928 aa9.87□□□□□ -0.83
MSH3-203ENST00000512531 ZCCHC9Q8N567 271 aaKnown RBP9.87□□□□□ -0.83
MSH3-203ENST00000512531 COLGALT1Q8NBJ5 622 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms