RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 PCDHGA1Q9Y5H4 931 aa12.85□□□□□ -0.35
DDR1-267ENST00000512336 ATP6V1DQ9Y5K8 247 aa12.85□□□□□ -0.35
DDR1-267ENST00000512336 FRMD3A2A2Y4 597 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 CYP26A1O43174 497 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 PAPSS1O43252 624 aaPredicted RBP12.84□□□□□ -0.35
DDR1-267ENST00000512336 RFPL3O75679 317 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 FSBPO95073 299 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 BMP15O95972 392 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 PENKP01210 267 aaPredicted RBP12.84□□□□□ -0.35
DDR1-267ENST00000512336 CCDC130P13994 396 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 MAP3K7CLP57077 242 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 CXADRP78310 365 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 DNAJC3Q13217 504 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 RTP5Q14D33 572 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 HES3Q5TGS1 186 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 RRAGBQ5VZM2 374 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 SERPINA13PQ6UXR4 307 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 GPRIN1Q7Z2K8 1008 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 ADAT2Q7Z6V5 191 aaKnown RBP12.84□□□□□ -0.35
DDR1-267ENST00000512336 CCDC127Q96BQ5 260 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 BIRC7Q96CA5 298 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 CIPCQ9C0C6 399 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 FBXO44Q9H4M3 255 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 PANK4Q9NVE7 773 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 ELOVL2Q9NXB9 296 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 CCDC39Q9UFE4 941 aa12.84□□□□□ -0.35
DDR1-267ENST00000512336 A0A1B0GTQ1 180 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 CAPN8A6NHC0 703 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 STC2O76061 302 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
DDR1-267ENST00000512336 SEMA4FO95754 770 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 STAU1O95793 577 aaKnown RBP12.83□□□□□ -0.36
DDR1-267ENST00000512336 KLKB1P03952 638 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 RARGP13631 454 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 CD27P26842 260 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 PLA2G4AP47712 749 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 TLE3Q04726 772 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 TRPC3Q13507 836 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 SNRNP35Q16560 246 aaKnown RBP12.83□□□□□ -0.36
DDR1-267ENST00000512336 PRAMEF14Q5SWL7 426 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 SCARA5Q6ZMJ2 495 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 ANKS1BQ7Z6G8 1248 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 ACOT1Q86TX2 421 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 RBBP8NLQ8NC74 664 aaPredicted RBP12.83□□□□□ -0.36
DDR1-267ENST00000512336 OR2T3Q8NH03 318 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 ZNF516Q92618 1163 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 PIWIL1Q96J94 861 aaKnown RBP12.83□□□□□ -0.36
DDR1-267ENST00000512336 CNDP2Q96KP4 475 aaKnown RBP12.83□□□□□ -0.36
DDR1-267ENST00000512336 TNIP3Q96KP6 325 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 NRSN2Q9GZP1 204 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 CLEC4EQ9ULY5 219 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 SMC3Q9UQE7 1217 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 NUMA1Q14980 2115 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 CKAP5Q14008 2032 aa12.83□□□□□ -0.36
DDR1-267ENST00000512336 A0A1W2PQH9 124 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 PYCARD-AS1I3L0S3 204 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 BRINP1O60477 761 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 TSPAN3O60637 253 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 CLSTN1O94985 981 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 PDCP20941 246 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 GJB2P29033 226 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 ATICP31939 592 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 HOXD13P35453 343 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 ACADVLP49748 655 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 CYP24A1Q07973 514 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 CAMK2GQ13555 558 aaPredicted RBP12.82□□□□□ -0.36
DDR1-267ENST00000512336 PSMD6Q15008 389 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 EIF4HQ15056 248 aaKnown RBP12.82□□□□□ -0.36
DDR1-267ENST00000512336 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 TAF1BQ53T94 588 aaPredicted RBP12.82□□□□□ -0.36
DDR1-267ENST00000512336 C10orf120Q5SQS8 335 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 TMEM215Q68D42 235 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 FBXL19Q6PCT2 694 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 KLHDC10Q6PID8 442 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 SPACA3Q8IXA5 215 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 FGF11Q92914 225 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 HPS3Q969F9 1004 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
DDR1-267ENST00000512336 JAKMIP2Q96AA8 810 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 TMEM176AQ96HP8 235 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 ORAI3Q9BRQ5 295 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
DDR1-267ENST00000512336 SDCBP2Q9H190 292 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 CLMPQ9H6B4 373 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 CSNK1G1Q9HCP0 422 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
DDR1-267ENST00000512336 SCML2Q9UQR0 700 aa12.82□□□□□ -0.36
DDR1-267ENST00000512336 COL5A1P20908 1838 aaPredicted RBP12.82□□□□□ -0.36
DDR1-267ENST00000512336 KNTC1P50748 2209 aa12.81□□□□□ -0.36
DDR1-267ENST00000512336 COL12A1Q99715 3063 aa12.81□□□□□ -0.36
DDR1-267ENST00000512336 ERVH48-1M5A8F1 160 aa12.81□□□□□ -0.36
DDR1-267ENST00000512336 DFNA5O60443 496 aa12.81□□□□□ -0.36
DDR1-267ENST00000512336 MBD3O95983 291 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms