RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 LRRC4CQ9HCJ2 640 aa8.28□□□□□ -1.08
NEK1-208ENST00000512193 PAPOLBQ9NRJ5 636 aaKnown RBP8.28□□□□□ -1.08
NEK1-208ENST00000512193 ETNK2Q9NVF9 386 aa8.28□□□□□ -1.08
NEK1-208ENST00000512193 GID8Q9NWU2 228 aa8.28□□□□□ -1.08
NEK1-208ENST00000512193 NCKIPSDQ9NZQ3 722 aa8.28□□□□□ -1.08
NEK1-208ENST00000512193 SLC8A2Q9UPR5 921 aa8.28□□□□□ -1.08
NEK1-208ENST00000512193 PKP3Q9Y446 797 aa8.28□□□□□ -1.08
NEK1-208ENST00000512193 CASTOR2A6NHX0 329 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 PHGDHO43175 533 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 B4GALT5O43286 388 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 ASS1P00966 412 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 PLK1P53350 603 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 KCNK10P57789 538 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 ZC3H12AQ5D1E8 599 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 GJC2Q5T442 439 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 RNF43Q68DV7 783 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 PTRHD1Q6GMV3 140 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 OTOAQ7RTW8 1153 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 PTAR1Q7Z6K3 402 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 KIAA0319LQ8IZA0 1049 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 DNAJB3Q8WWF6 145 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 PYDC1Q8WXC3 89 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 INPP5DQ92835 1189 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 CEP19Q96LK0 163 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 RNF157Q96PX1 679 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 GCNAQ96QF7 691 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 SNRNP25Q9BV90 132 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 C12orf65Q9H3J6 166 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 ACSS3Q9H6R3 686 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 TMEM134Q9H6X4 195 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 GPAMQ9HCL2 828 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 SIX2Q9NPC8 291 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 DDX43Q9NXZ2 648 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 LZTS1Q9Y250 596 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 RIPK3Q9Y572 518 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 BCL9LQ86UU0 1499 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 IQCA1LA6NCM1 817 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 TMEM191CA6NGB0 347 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 NCF1BA6NI72 391 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 NCF1CA8MVU1 366 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 DDNO94850 711 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 ABHD2P08910 425 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 NCF1P14598 390 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 MMP8P22894 467 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 TMEM132BQ14DG7 1078 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 ACAP1Q15027 740 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 GRIK4Q16099 956 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 TTC33Q6PID6 262 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
NEK1-208ENST00000512193 C12orf29Q8N999 325 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 KYQ8NBH2 561 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 ZC3H15Q8WU90 426 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 APBA2Q99767 749 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 APOL5Q9BWW9 433 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 KLHL4Q9C0H6 718 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 ASCC2Q9H1I8 757 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 NT5MQ9NPB1 228 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 WDR70Q9NW82 654 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 KIF17Q9P2E2 1029 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 UMODL1Q5DID0 1318 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 KRT36O76013 467 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 UPP2O95045 317 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 CST3P01034 146 aaPredicted RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 ITGAVP06756 1048 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 THP07101 528 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 IRF1P10914 325 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 CETPP11597 493 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 SLC25A3Q00325 362 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 SNX32Q86XE0 403 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 LRRC15Q8TF66 581 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 GPR63Q9BZJ6 419 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 MUC3BQ9H195 1237 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 UTP6Q9NYH9 597 aaKnown RBP8.27□□□□□ -1.09
NEK1-208ENST00000512193 COL20A1Q9P218 1284 aa8.27□□□□□ -1.09
NEK1-208ENST00000512193 STX7O15400 261 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 TSPAN3O60637 253 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 EDF1O60869 148 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 LYPLA2O95372 231 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 ZNF143P52747 638 aaPredicted RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 NAGLUP54802 743 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 POU4F1Q01851 419 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 FASTKD3Q14CZ7 662 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 VEPH1Q14D04 833 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 THEMIS2Q5TEJ8 643 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 MRNIPQ6NTE8 343 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 FAM183BPQ6ZVS7 135 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 KCNMB4Q86W47 210 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 DCP1BQ8IZD4 617 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 DIS3LQ8TF46 1054 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 SYT15Q9BQS2 421 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 MECRQ9BV79 373 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 TRPC7Q9HCX4 862 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 SLC17A7Q9P2U7 560 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 NUDT5Q9UKK9 219 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 TCRBV9S1A1TA0A576 114 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 C17orf102A2RUQ5 167 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 RECQL4O94761 1208 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 DDHD2O94830 711 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms