RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 PDILTQ8N807 584 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 IGSF8Q969P0 613 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 PRORYQ9H606 182 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 TM9SF3Q9HD45 589 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 FBXO10Q9UK96 956 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 SCML2Q9UQR0 700 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 SRPRBQ9Y5M8 271 aaKnown RBP13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 AK5Q9Y6K8 562 aa13.91□□□□□ -0.18
POLR2J3-216ENST00000511773 HECTD1Q9ULT8 2610 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 CBX4O00257 560 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 TLX3O43711 291 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 FSBPO95073 299 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 FAM200BP0CF97 657 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 EIF2S3P41091 472 aaKnown RBP13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 PLA2G4AP47712 749 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 ARID5AQ03989 594 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 INAVAQ3KP66 663 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 C6orf118Q5T5N4 469 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 TMPRSS12Q86WS5 348 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 ZNF366Q8N895 744 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 C12orf29Q8N999 325 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 XXYLT1Q8NBI6 393 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 PCED1AQ9H1Q7 454 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 LHX5Q9H2C1 402 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 CSNK1G1Q9HCP0 422 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 ELOVL2Q9NXB9 296 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 RASAL2Q9UJF2 1139 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 NAGPAQ9UK23 515 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 CLEC4EQ9ULY5 219 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 MGAQ8IWI9 3026 aa13.9□□□□□ -0.18
POLR2J3-216ENST00000511773 MYO18BQ8IUG5 2567 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 E9PAM4 449 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 RRP8O43159 456 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 PCDHGA12O60330 932 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 CD2BP2O95400 341 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 SEMA4FO95754 770 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 KLKB1P03952 638 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 JUPP14923 745 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 CORO1AP31146 461 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 HNF1BP35680 557 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 GRIA4P48058 902 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 NDST1P52848 882 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 NCOA4Q13772 614 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 RABEP1Q15276 862 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 GATAD2AQ86YP4 633 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 ZNF843Q8N446 348 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 OR2T3Q8NH03 318 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 BIRC7Q96CA5 298 aa13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 PIWIL1Q96J94 861 aaKnown RBP13.89□□□□□ -0.19
POLR2J3-216ENST00000511773 EIF3DO15371 548 aaKnown RBP eCLIP13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 CTSKP43235 329 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 ASIC1P78348 528 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 DNAJC3Q13217 504 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 FNDC3BQ53EP0 1204 aaKnown RBP13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 PRAMEF14Q5SWL7 426 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 TMEM215Q68D42 235 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 KLHDC10Q6PID8 442 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 EPM2AIP1Q7L775 607 aaPredicted RBP13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 DDI1Q8WTU0 396 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 ATMQ13315 3056 aa13.88□□□□□ -0.19
POLR2J3-216ENST00000511773 PLXNA2O75051 1894 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 CYSRT1A8MQ03 144 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 HHLA1C9JL84 531 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 ENC1O14682 589 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 KIF20AO95235 890 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 CYBBP04839 570 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 CD27P26842 260 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 CHKAP35790 457 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 BCAT1P54687 386 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 C21orf59P57076 290 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 EFEMP1Q12805 493 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 TARDBPQ13148 414 aaKnown RBP eCLIP13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 FAM26FQ5R3K3 315 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 SCD5Q86SK9 330 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 TADA2BQ86TJ2 420 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 DENND1CQ8IV53 801 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 RBBP8NLQ8NC74 664 aaPredicted RBP13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 PLEKHO2Q8TD55 490 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 CYB5D2Q8WUJ1 264 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 BAP1Q92560 729 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 CNDP2Q96KP4 475 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 BTBD1Q9H0C5 482 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 VRTNQ9H8Y1 702 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 AGO1Q9UL18 857 aaKnown RBP13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 ZNF510Q9Y2H8 683 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 PCDHA5Q9Y5H7 936 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 MYLKQ15746 1914 aa13.87□□□□□ -0.19
POLR2J3-216ENST00000511773 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
POLR2J3-216ENST00000511773 LRRIQ3A6PVS8 624 aaPredicted RBP13.86□□□□□ -0.19
POLR2J3-216ENST00000511773 CAPN9O14815 690 aa13.86□□□□□ -0.19
POLR2J3-216ENST00000511773 EXOC3O60645 756 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms