RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 PCDHA7Q9UN72 937 aa3.34□□□□□ -1.87
MATR3-217ENST00000511333 LOC105371045A0A1W2PR82 267 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 MARCH6O60337 910 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 ZNF432O94892 652 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 CHRNB1P11230 501 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 EN2P19622 333 aaPredicted RBP3.33□□□□□ -1.88
MATR3-217ENST00000511333 HOXC13P31276 330 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 AGFG1P52594 562 aaKnown RBP3.33□□□□□ -1.88
MATR3-217ENST00000511333 RAE1P78406 368 aaKnown RBP3.33□□□□□ -1.88
MATR3-217ENST00000511333 GAD2Q05329 585 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 CNGA3Q16281 694 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 SMTNL2Q2TAL5 461 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 BRDTQ58F21 947 aaPredicted RBP3.33□□□□□ -1.88
MATR3-217ENST00000511333 SWSAP1Q6NVH7 229 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 TRAPPC11Q7Z392 1133 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 MICU3Q86XE3 530 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 UEVLDQ8IX04 471 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 LMO3Q8TAP4 145 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 BCAS4Q8TDM0 211 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 NUP88Q99567 741 aaPredicted RBP3.33□□□□□ -1.88
MATR3-217ENST00000511333 FZD3Q9NPG1 666 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 PAPOLBQ9NRJ5 636 aaKnown RBP3.33□□□□□ -1.88
MATR3-217ENST00000511333 THSD1Q9NS62 852 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 ASNSD1Q9NWL6 643 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 ITGB1BP2Q9UKP3 347 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 PCDHB2Q9Y5E7 798 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 SHROOM4Q9ULL8 1493 aa3.33□□□□□ -1.88
MATR3-217ENST00000511333 EVPLQ92817 2033 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 H3BML4 177 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 SPTLC2O15270 562 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 PRPF4O43172 522 aaKnown RBP eCLIP3.32□□□□□ -1.88
MATR3-217ENST00000511333 CCP110O43303 1012 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 MBPP02686 304 aaPredicted RBP3.32□□□□□ -1.88
MATR3-217ENST00000511333 BRAFP15056 766 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 TBXAS1P24557 533 aaPredicted RBP3.32□□□□□ -1.88
MATR3-217ENST00000511333 KRT2P35908 639 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 CPT1AP50416 773 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 PRAMEF19Q5SWL8 479 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 TRILQ7L0X0 811 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 SMCR8Q8TEV9 937 aaPredicted RBP3.32□□□□□ -1.88
MATR3-217ENST00000511333 TMEM174Q8WUU8 243 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 EME1Q96AY2 570 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 HOMER2Q9NSB8 354 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 IPO11Q9UI26 975 aaKnown RBP3.32□□□□□ -1.88
MATR3-217ENST00000511333 MID2Q9UJV3 735 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 UTS2RQ9UKP6 389 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 ICAM5Q9UMF0 924 aa3.32□□□□□ -1.88
MATR3-217ENST00000511333 TP53BP1Q12888 1972 aaPredicted RBP3.32□□□□□ -1.88
MATR3-217ENST00000511333 SPATA31A1Q5TZJ5 1347 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 RPS10-NUDT3A0A1W2PQS6 291 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 MBD3L4A6NDZ8 208 aaPredicted RBP3.31□□□□□ -1.88
MATR3-217ENST00000511333 MBD3L3A6NE82 208 aaPredicted RBP3.31□□□□□ -1.88
MATR3-217ENST00000511333 A6NNC1 897 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 FAM227AF5H4B4 570 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 AKAP10O43572 662 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 ATG13O75143 517 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 HSPA6P17066 643 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 TFEBP19484 476 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 KLRC1P26715 233 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 ACVR2AP27037 513 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 KCNJ4P48050 445 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 INO80DQ53TQ3 878 aaPredicted RBP3.31□□□□□ -1.88
MATR3-217ENST00000511333 BSPRYQ5W0U4 402 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 NADSYN1Q6IA69 706 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 B3GNT9Q6UX72 402 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 SLC39A5Q6ZMH5 540 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 ZBTB34Q8NCN2 500 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 LPAR1Q92633 364 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 CELF1Q92879 486 aaKnown RBP3.31□□□□□ -1.88
MATR3-217ENST00000511333 GATA5Q9BWX5 397 aaPredicted RBP3.31□□□□□ -1.88
MATR3-217ENST00000511333 DNAJB11Q9UBS4 358 aa3.31□□□□□ -1.88
MATR3-217ENST00000511333 A0A0G2JK05 382 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 CFAP69A5D8W1 941 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 TRIM43BA6NCK2 446 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 MAP4K4O95819 1239 aaPredicted RBP3.3□□□□□ -1.88
MATR3-217ENST00000511333 SLC3A2P08195 630 aaKnown RBP3.3□□□□□ -1.88
MATR3-217ENST00000511333 AZU1P20160 251 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 RBL1P28749 1068 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 CIITAP33076 1130 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 COMPP49747 757 aaPredicted RBP3.3□□□□□ -1.88
MATR3-217ENST00000511333 NEK2P51955 445 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 RPS16P62249 146 aaKnown RBP3.3□□□□□ -1.88
MATR3-217ENST00000511333 GAB1Q13480 694 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 DLGAP5Q15398 846 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 IZUMO4Q1ZYL8 232 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 SLC4A8Q2Y0W8 1093 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 ANO6Q4KMQ2 910 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 PLAG1Q6DJT9 500 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 HMBOX1Q6NT76 420 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 DHRS13Q6UX07 377 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 TPH2Q8IWU9 490 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 ARL14EPQ8N8R7 260 aaPredicted RBP3.3□□□□□ -1.88
MATR3-217ENST00000511333 KAT2BQ92831 832 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 TRIM43Q96BQ3 446 aaPredicted RBP3.3□□□□□ -1.88
MATR3-217ENST00000511333 HES6Q96HZ4 224 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 SUCLG2Q96I99 432 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 TTLL2Q9BWV7 592 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 B3GNT5Q9BYG0 378 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 TCF7L1Q9HCS4 588 aa3.3□□□□□ -1.88
MATR3-217ENST00000511333 ABHD10Q9NUJ1 306 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms